Protein–RNA interactions for Protein: Q9UBF6

RNF7, RING-box protein 2, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7Q9UBF6 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RNF7Q9UBF6 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
RNF7Q9UBF6 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RNF7Q9UBF6 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
RNF7Q9UBF6 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RNF7Q9UBF6 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
RNF7Q9UBF6 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RNF7Q9UBF6 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.05□□□□□ -0.48
RNF7Q9UBF6 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.05□□□□□ -0.48
RNF7Q9UBF6 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RNF7Q9UBF6 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC12.05□□□□□ -0.48
RNF7Q9UBF6 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RNF7Q9UBF6 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RNF7Q9UBF6 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
RNF7Q9UBF6 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.05□□□□□ -0.48
RNF7Q9UBF6 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
RNF7Q9UBF6 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.05□□□□□ -0.48
RNF7Q9UBF6 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC12.05□□□□□ -0.48
RNF7Q9UBF6 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 KRTAP19-9P-201ENST00000421795 191 ntBASIC12.04□□□□□ -0.48
RNF7Q9UBF6 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 AC006335.1-201ENST00000445200 547 ntBASIC12.04□□□□□ -0.48
RNF7Q9UBF6 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 DUX4L50-201ENST00000455245 715 ntBASIC12.04□□□□□ -0.48
RNF7Q9UBF6 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 PFN2-206ENST00000461930 606 ntTSL 4 BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 LINC00115-201ENST00000473798 1317 ntBASIC12.04□□□□□ -0.48
RNF7Q9UBF6 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.04□□□□□ -0.48
RNF7Q9UBF6 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RNF7Q9UBF6 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
RNF7Q9UBF6 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC12.03□□□□□ -0.48
RNF7Q9UBF6 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC12.03□□□□□ -0.48
RNF7Q9UBF6 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RNF7Q9UBF6 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
RNF7Q9UBF6 GRK6P1-201ENST00000400595 1711 ntBASIC12.03□□□□□ -0.48
RNF7Q9UBF6 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC12.03□□□□□ -0.48
RNF7Q9UBF6 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RNF7Q9UBF6 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
RNF7Q9UBF6 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.03□□□□□ -0.48
RNF7Q9UBF6 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
RNF7Q9UBF6 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RNF7Q9UBF6 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
RNF7Q9UBF6 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RNF7Q9UBF6 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
RNF7Q9UBF6 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.03□□□□□ -0.48
RNF7Q9UBF6 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
RNF7Q9UBF6 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms