Protein–RNA interactions for Protein: Q9BY41

HDAC8, Histone deacetylase 8, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8Q9BY41 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 IL9RP3-201ENST00000442856 1674 ntBASIC14.05□□□□□ -0.16
HDAC8Q9BY41 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 NME4-203ENST00000397722 1232 ntTSL 2 BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 RNA5SP406-201ENST00000516106 112 ntBASIC14.05□□□□□ -0.16
HDAC8Q9BY41 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
HDAC8Q9BY41 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC14.04□□□□□ -0.16
HDAC8Q9BY41 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HDAC8Q9BY41 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.04□□□□□ -0.16
HDAC8Q9BY41 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDAC8Q9BY41 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC14.04□□□□□ -0.16
HDAC8Q9BY41 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HDAC8Q9BY41 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDAC8Q9BY41 HSPA7-201ENST00000445535 1927 ntBASIC14.04□□□□□ -0.16
HDAC8Q9BY41 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
HDAC8Q9BY41 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HDAC8Q9BY41 CICP16-201ENST00000502609 2813 ntBASIC14.04□□□□□ -0.16
HDAC8Q9BY41 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDAC8Q9BY41 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HDAC8Q9BY41 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC14.04□□□□□ -0.16
HDAC8Q9BY41 AC012362.1-201ENST00000434906 739 ntBASIC14.04□□□□□ -0.16
HDAC8Q9BY41 AC004837.1-201ENST00000446267 564 ntBASIC14.04□□□□□ -0.16
HDAC8Q9BY41 PRSS3P1-201ENST00000503996 742 ntBASIC14.04□□□□□ -0.16
HDAC8Q9BY41 IGHV1-12-201ENST00000518307 205 ntBASIC14.04□□□□□ -0.16
HDAC8Q9BY41 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC14.04□□□□□ -0.16
HDAC8Q9BY41 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC14.04□□□□□ -0.16
HDAC8Q9BY41 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC14.04□□□□□ -0.16
HDAC8Q9BY41 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC14.04□□□□□ -0.16
HDAC8Q9BY41 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC14.04□□□□□ -0.16
HDAC8Q9BY41 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC14.04□□□□□ -0.16
HDAC8Q9BY41 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDAC8Q9BY41 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.04□□□□□ -0.16
HDAC8Q9BY41 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDAC8Q9BY41 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
HDAC8Q9BY41 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDAC8Q9BY41 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.04□□□□□ -0.16
HDAC8Q9BY41 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
HDAC8Q9BY41 AC061965.1-201ENST00000560524 1465 ntBASIC14.04□□□□□ -0.16
HDAC8Q9BY41 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDAC8Q9BY41 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDAC8Q9BY41 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDAC8Q9BY41 AL596257.1-201ENST00000641463 2694 ntBASIC14.04□□□□□ -0.16
HDAC8Q9BY41 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC14.04□□□□□ -0.16
HDAC8Q9BY41 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDAC8Q9BY41 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
HDAC8Q9BY41 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.03□□□□□ -0.16
HDAC8Q9BY41 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDAC8Q9BY41 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDAC8Q9BY41 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDAC8Q9BY41 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.03□□□□□ -0.16
HDAC8Q9BY41 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
HDAC8Q9BY41 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDAC8Q9BY41 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDAC8Q9BY41 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDAC8Q9BY41 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDAC8Q9BY41 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
HDAC8Q9BY41 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDAC8Q9BY41 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
HDAC8Q9BY41 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDAC8Q9BY41 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
HDAC8Q9BY41 OR52M2P-201ENST00000414298 959 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms