Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 TMBIM7P-202ENST00000641474 1516 ntBASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
HDHD3Q9BSH5 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 AC004623.1-201ENST00000624592 2127 ntBASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 C2orf27AP3-201ENST00000434123 579 ntBASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 RN7SL713P-201ENST00000582127 302 ntBASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 YTHDF3-AS1-201ENST00000603538 718 ntBASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 AC244669.2-201ENST00000612320 853 ntBASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 AL354718.3-201ENST00000616414 581 ntBASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 CR382287.1-201ENST00000623954 586 ntBASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
HDHD3Q9BSH5 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 AL445250.1-201ENST00000641671 2259 ntBASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 AC092933.1-201ENST00000393644 945 ntBASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 INE1-201ENST00000456273 945 ntBASIC12.09□□□□□ -0.47
HDHD3Q9BSH5 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms