Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CCNB3Q8WWL7 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC21.61■■□□□ 1.05
CCNB3Q8WWL7 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCNB3Q8WWL7 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC21.61■■□□□ 1.05
CCNB3Q8WWL7 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC21.61■■□□□ 1.05
CCNB3Q8WWL7 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC21.61■■□□□ 1.05
CCNB3Q8WWL7 AC005486.1-201ENST00000466775 216 ntTSL 3 BASIC21.61■■□□□ 1.05
CCNB3Q8WWL7 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCNB3Q8WWL7 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CCNB3Q8WWL7 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC21.61■■□□□ 1.05
CCNB3Q8WWL7 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CCNB3Q8WWL7 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
CCNB3Q8WWL7 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCNB3Q8WWL7 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CCNB3Q8WWL7 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC21.6■■□□□ 1.05
CCNB3Q8WWL7 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CCNB3Q8WWL7 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC21.6■■□□□ 1.05
CCNB3Q8WWL7 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCNB3Q8WWL7 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CCNB3Q8WWL7 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCNB3Q8WWL7 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC21.6■■□□□ 1.05
CCNB3Q8WWL7 AC068760.1-201ENST00000493579 1953 ntBASIC21.6■■□□□ 1.05
CCNB3Q8WWL7 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CCNB3Q8WWL7 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
CCNB3Q8WWL7 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC21.6■■□□□ 1.05
CCNB3Q8WWL7 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CCNB3Q8WWL7 AC008026.2-201ENST00000495438 348 ntBASIC21.6■■□□□ 1.05
CCNB3Q8WWL7 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC21.6■■□□□ 1.05
CCNB3Q8WWL7 BATF-202ENST00000555504 361 ntTSL 2 BASIC21.6■■□□□ 1.05
CCNB3Q8WWL7 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC21.6■■□□□ 1.05
CCNB3Q8WWL7 AL118516.1-201ENST00000564152 670 ntBASIC21.6■■□□□ 1.05
CCNB3Q8WWL7 AC010632.2-201ENST00000588369 1224 ntBASIC21.6■■□□□ 1.05
CCNB3Q8WWL7 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC21.59■■□□□ 1.05
CCNB3Q8WWL7 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCNB3Q8WWL7 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNB3Q8WWL7 AL157996.1-201ENST00000624684 2299 ntBASIC21.59■■□□□ 1.05
CCNB3Q8WWL7 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
CCNB3Q8WWL7 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNB3Q8WWL7 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC21.59■■□□□ 1.05
CCNB3Q8WWL7 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNB3Q8WWL7 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC21.59■■□□□ 1.05
CCNB3Q8WWL7 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
CCNB3Q8WWL7 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNB3Q8WWL7 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC21.59■■□□□ 1.05
CCNB3Q8WWL7 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC21.59■■□□□ 1.05
CCNB3Q8WWL7 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCNB3Q8WWL7 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNB3Q8WWL7 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC21.59■■□□□ 1.05
CCNB3Q8WWL7 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC21.59■■□□□ 1.05
CCNB3Q8WWL7 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNB3Q8WWL7 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CCNB3Q8WWL7 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CCNB3Q8WWL7 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CCNB3Q8WWL7 AC073210.1-201ENST00000414799 232 ntBASIC21.59■■□□□ 1.05
CCNB3Q8WWL7 KRT18P62-201ENST00000446618 1287 ntBASIC21.59■■□□□ 1.05
CCNB3Q8WWL7 AGPAT5P1-201ENST00000455855 1019 ntBASIC21.59■■□□□ 1.05
CCNB3Q8WWL7 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC21.59■■□□□ 1.05
CCNB3Q8WWL7 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CCNB3Q8WWL7 PPCDC-206ENST00000564923 757 ntTSL 5 BASIC21.59■■□□□ 1.05
CCNB3Q8WWL7 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCNB3Q8WWL7 AC132825.4-202ENST00000578792 434 ntBASIC21.59■■□□□ 1.05
CCNB3Q8WWL7 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CCNB3Q8WWL7 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNB3Q8WWL7 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CCNB3Q8WWL7 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCNB3Q8WWL7 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCNB3Q8WWL7 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.05
CCNB3Q8WWL7 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.05
CCNB3Q8WWL7 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCNB3Q8WWL7 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCNB3Q8WWL7 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
CCNB3Q8WWL7 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCNB3Q8WWL7 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CCNB3Q8WWL7 NID2-208ENST00000617139 3827 ntTSL 5 BASIC21.58■■□□□ 1.05
CCNB3Q8WWL7 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC21.58■■□□□ 1.05
CCNB3Q8WWL7 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CCNB3Q8WWL7 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCNB3Q8WWL7 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC21.58■■□□□ 1.04
CCNB3Q8WWL7 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCNB3Q8WWL7 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCNB3Q8WWL7 AC234644.1-201ENST00000406065 370 ntBASIC21.58■■□□□ 1.04
CCNB3Q8WWL7 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC21.58■■□□□ 1.04
CCNB3Q8WWL7 EEF1DP2-201ENST00000433698 843 ntBASIC21.58■■□□□ 1.04
CCNB3Q8WWL7 FAM86B3P-203ENST00000523992 854 ntBASIC21.58■■□□□ 1.04
CCNB3Q8WWL7 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC21.58■■□□□ 1.04
CCNB3Q8WWL7 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CCNB3Q8WWL7 RN7SL556P-201ENST00000582856 298 ntBASIC21.58■■□□□ 1.04
CCNB3Q8WWL7 MIA-206ENST00000597784 455 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.04
CCNB3Q8WWL7 HMGB1P24-201ENST00000611897 328 ntBASIC21.58■■□□□ 1.04
CCNB3Q8WWL7 AC004554.1-201ENST00000422830 1468 ntBASIC21.58■■□□□ 1.04
CCNB3Q8WWL7 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCNB3Q8WWL7 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCNB3Q8WWL7 OS9-204ENST00000389146 2091 ntTSL 2 BASIC21.58■■□□□ 1.04
CCNB3Q8WWL7 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCNB3Q8WWL7 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CCNB3Q8WWL7 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC21.57■■□□□ 1.04
CCNB3Q8WWL7 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCNB3Q8WWL7 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CCNB3Q8WWL7 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CCNB3Q8WWL7 AL365181.1-201ENST00000564032 1828 ntBASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms