Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM23P36406 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
TRIM23P36406 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM23P36406 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM23P36406 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM23P36406 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRIM23P36406 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
TRIM23P36406 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM23P36406 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM23P36406 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM23P36406 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC14.01□□□□□ -0.17
TRIM23P36406 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRIM23P36406 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM23P36406 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM23P36406 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
TRIM23P36406 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM23P36406 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRIM23P36406 SLC9A3P3-201ENST00000457608 2229 ntBASIC14□□□□□ -0.17
TRIM23P36406 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14□□□□□ -0.17
TRIM23P36406 AC006372.4-201ENST00000624122 1543 ntBASIC14□□□□□ -0.17
TRIM23P36406 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRIM23P36406 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14□□□□□ -0.17
TRIM23P36406 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM23P36406 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
TRIM23P36406 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
TRIM23P36406 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
TRIM23P36406 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14□□□□□ -0.17
TRIM23P36406 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM23P36406 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM23P36406 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM23P36406 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRIM23P36406 DUT-208ENST00000559540 1441 ntTSL 2 BASIC14□□□□□ -0.17
TRIM23P36406 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM23P36406 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM23P36406 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM23P36406 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TRIM23P36406 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM23P36406 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRIM23P36406 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM23P36406 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC14□□□□□ -0.17
TRIM23P36406 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TRIM23P36406 SAT1-201ENST00000379251 801 ntTSL 2 BASIC14□□□□□ -0.17
TRIM23P36406 SAT1-202ENST00000379253 909 ntTSL 2 BASIC14□□□□□ -0.17
TRIM23P36406 SAT1-203ENST00000379254 868 ntTSL 3 BASIC14□□□□□ -0.17
TRIM23P36406 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM23P36406 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC14□□□□□ -0.17
TRIM23P36406 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM23P36406 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM23P36406 AC098934.1-203ENST00000442868 1262 ntBASIC14□□□□□ -0.17
TRIM23P36406 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC14□□□□□ -0.17
TRIM23P36406 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC14□□□□□ -0.17
TRIM23P36406 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC14□□□□□ -0.17
TRIM23P36406 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC14□□□□□ -0.17
TRIM23P36406 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC14□□□□□ -0.17
TRIM23P36406 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC14□□□□□ -0.17
TRIM23P36406 AC138701.2-201ENST00000553634 226 ntBASIC14□□□□□ -0.17
TRIM23P36406 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC14□□□□□ -0.17
TRIM23P36406 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC14□□□□□ -0.17
TRIM23P36406 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC14□□□□□ -0.17
TRIM23P36406 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC14□□□□□ -0.17
TRIM23P36406 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC14□□□□□ -0.17
TRIM23P36406 SIGLEC22P-201ENST00000599104 714 ntBASIC14□□□□□ -0.17
TRIM23P36406 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC14□□□□□ -0.17
TRIM23P36406 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC14□□□□□ -0.17
TRIM23P36406 AC087392.5-201ENST00000612517 489 ntBASIC14□□□□□ -0.17
TRIM23P36406 AC025262.2-201ENST00000623975 1056 ntBASIC14□□□□□ -0.17
TRIM23P36406 AC009145.4-201ENST00000625119 1294 ntBASIC14□□□□□ -0.17
TRIM23P36406 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC14□□□□□ -0.17
TRIM23P36406 RETN-203ENST00000629642 400 ntTSL 5 BASIC14□□□□□ -0.17
TRIM23P36406 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14□□□□□ -0.17
TRIM23P36406 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
TRIM23P36406 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM23P36406 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRIM23P36406 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14□□□□□ -0.17
TRIM23P36406 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRIM23P36406 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM23P36406 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
TRIM23P36406 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM23P36406 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TRIM23P36406 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRIM23P36406 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
TRIM23P36406 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM23P36406 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM23P36406 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14□□□□□ -0.17
TRIM23P36406 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC14□□□□□ -0.17
TRIM23P36406 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC14□□□□□ -0.17
TRIM23P36406 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
TRIM23P36406 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14□□□□□ -0.17
TRIM23P36406 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM23P36406 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC13.99□□□□□ -0.17
TRIM23P36406 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM23P36406 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM23P36406 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM23P36406 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.99□□□□□ -0.17
TRIM23P36406 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM23P36406 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM23P36406 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM23P36406 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM23P36406 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRIM23P36406 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms