Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
HMGCLP35914 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC14.17□□□□□ -0.14
HMGCLP35914 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCLP35914 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.17□□□□□ -0.14
HMGCLP35914 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
HMGCLP35914 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HMGCLP35914 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCLP35914 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCLP35914 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
HMGCLP35914 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HMGCLP35914 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
HMGCLP35914 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCLP35914 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCLP35914 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCLP35914 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
HMGCLP35914 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCLP35914 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.17□□□□□ -0.14
HMGCLP35914 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCLP35914 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.17□□□□□ -0.14
HMGCLP35914 PDIA3P2-201ENST00000428073 158 ntBASIC14.17□□□□□ -0.14
HMGCLP35914 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.17□□□□□ -0.14
HMGCLP35914 AL353637.1-201ENST00000451571 732 ntBASIC14.17□□□□□ -0.14
HMGCLP35914 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.17□□□□□ -0.14
HMGCLP35914 AC012618.1-201ENST00000461223 412 ntBASIC14.17□□□□□ -0.14
HMGCLP35914 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
HMGCLP35914 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC14.17□□□□□ -0.14
HMGCLP35914 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
HMGCLP35914 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.17□□□□□ -0.14
HMGCLP35914 NAT9-211ENST00000580632 799 ntTSL 3 BASIC14.17□□□□□ -0.14
HMGCLP35914 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.17□□□□□ -0.14
HMGCLP35914 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.17□□□□□ -0.14
HMGCLP35914 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCLP35914 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCLP35914 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCLP35914 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCLP35914 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
HMGCLP35914 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCLP35914 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCLP35914 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.17□□□□□ -0.14
HMGCLP35914 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCLP35914 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
HMGCLP35914 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HMGCLP35914 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.17□□□□□ -0.14
HMGCLP35914 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCLP35914 AL139158.3-201ENST00000641212 1562 ntBASIC14.17□□□□□ -0.14
HMGCLP35914 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCLP35914 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HMGCLP35914 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
HMGCLP35914 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HMGCLP35914 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGCLP35914 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGCLP35914 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGCLP35914 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGCLP35914 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
HMGCLP35914 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HMGCLP35914 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.16□□□□□ -0.14
HMGCLP35914 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.16□□□□□ -0.14
HMGCLP35914 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
HMGCLP35914 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGCLP35914 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
HMGCLP35914 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.16□□□□□ -0.14
HMGCLP35914 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGCLP35914 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGCLP35914 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.16□□□□□ -0.14
HMGCLP35914 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.16□□□□□ -0.14
HMGCLP35914 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
HMGCLP35914 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
HMGCLP35914 KRT17P5-201ENST00000332088 839 ntBASIC14.16□□□□□ -0.14
HMGCLP35914 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HMGCLP35914 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGCLP35914 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
HMGCLP35914 BX679664.3-201ENST00000414070 555 ntBASIC14.16□□□□□ -0.14
HMGCLP35914 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
HMGCLP35914 RPSAP15-201ENST00000448168 861 ntBASIC14.16□□□□□ -0.14
HMGCLP35914 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HMGCLP35914 AC113935.1-201ENST00000471722 555 ntBASIC14.16□□□□□ -0.14
HMGCLP35914 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HMGCLP35914 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.16□□□□□ -0.14
HMGCLP35914 CMC2-204ENST00000562713 573 ntTSL 3 BASIC14.16□□□□□ -0.14
HMGCLP35914 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.16□□□□□ -0.14
HMGCLP35914 CMC2-209ENST00000565108 399 ntTSL 2 BASIC14.16□□□□□ -0.14
HMGCLP35914 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.16□□□□□ -0.14
HMGCLP35914 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC14.16□□□□□ -0.14
HMGCLP35914 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGCLP35914 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
HMGCLP35914 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HMGCLP35914 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
HMGCLP35914 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HMGCLP35914 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGCLP35914 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.16□□□□□ -0.14
HMGCLP35914 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.16□□□□□ -0.14
HMGCLP35914 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
HMGCLP35914 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
HMGCLP35914 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HMGCLP35914 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HMGCLP35914 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HMGCLP35914 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HMGCLP35914 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HMGCLP35914 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.15□□□□□ -0.14
HMGCLP35914 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms