Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 TRPM1-210ENST00000559179 1002 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CPS1P31327 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPS1P31327 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC19.48■□□□□ 0.71
CPS1P31327 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPS1P31327 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPS1P31327 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPS1P31327 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPS1P31327 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CPS1P31327 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CPS1P31327 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
CPS1P31327 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CPS1P31327 SPC25-201ENST00000282074 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPS1P31327 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPS1P31327 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CPS1P31327 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CPS1P31327 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPS1P31327 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CPS1P31327 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC19.47■□□□□ 0.71
CPS1P31327 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CPS1P31327 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPS1P31327 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPS1P31327 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CPS1P31327 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC19.47■□□□□ 0.71
CPS1P31327 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPS1P31327 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPS1P31327 AC074019.1-201ENST00000428788 1096 ntBASIC19.47■□□□□ 0.71
CPS1P31327 ACTG1P23-201ENST00000437653 1074 ntBASIC19.47■□□□□ 0.71
CPS1P31327 HNRNPA1P73-201ENST00000446472 928 ntBASIC19.47■□□□□ 0.71
CPS1P31327 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC19.47■□□□□ 0.71
CPS1P31327 AC139493.2-202ENST00000510155 544 ntTSL 3 BASIC19.47■□□□□ 0.71
CPS1P31327 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC19.47■□□□□ 0.71
CPS1P31327 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC19.47■□□□□ 0.71
CPS1P31327 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC19.47■□□□□ 0.71
CPS1P31327 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.47■□□□□ 0.71
CPS1P31327 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CPS1P31327 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPS1P31327 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC19.47■□□□□ 0.71
CPS1P31327 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CPS1P31327 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CPS1P31327 TP73-207ENST00000378290 1831 ntTSL 2 BASIC19.47■□□□□ 0.71
CPS1P31327 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CPS1P31327 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC19.47■□□□□ 0.71
CPS1P31327 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC19.47■□□□□ 0.71
CPS1P31327 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC19.47■□□□□ 0.71
CPS1P31327 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
CPS1P31327 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC19.46■□□□□ 0.71
CPS1P31327 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
CPS1P31327 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.46■□□□□ 0.71
CPS1P31327 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
CPS1P31327 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CPS1P31327 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC19.46■□□□□ 0.71
CPS1P31327 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC19.46■□□□□ 0.71
CPS1P31327 AC006059.1-201ENST00000438017 722 ntTSL 5 BASIC19.46■□□□□ 0.71
CPS1P31327 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC19.46■□□□□ 0.71
CPS1P31327 PSMB8-AS1-206ENST00000458296 958 ntTSL 3 BASIC19.46■□□□□ 0.71
CPS1P31327 SMAD1-AS1-201ENST00000513542 481 ntTSL 2 BASIC19.46■□□□□ 0.71
CPS1P31327 THEG-204ENST00000530711 1162 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
CPS1P31327 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC19.46■□□□□ 0.71
CPS1P31327 MT1X-202ENST00000562939 538 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CPS1P31327 AC009119.3-202ENST00000566773 196 ntTSL 3 BASIC19.46■□□□□ 0.71
CPS1P31327 AC026461.1-201ENST00000567563 551 ntTSL 4 BASIC19.46■□□□□ 0.71
CPS1P31327 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC19.46■□□□□ 0.71
CPS1P31327 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC19.46■□□□□ 0.71
CPS1P31327 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPS1P31327 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPS1P31327 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CPS1P31327 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPS1P31327 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC19.46■□□□□ 0.71
CPS1P31327 IFNAR2-201ENST00000342101 2606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPS1P31327 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPS1P31327 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC19.46■□□□□ 0.71
CPS1P31327 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPS1P31327 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CPS1P31327 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPS1P31327 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.46■□□□□ 0.71
CPS1P31327 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
CPS1P31327 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC19.46■□□□□ 0.71
CPS1P31327 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPS1P31327 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CPS1P31327 HSD3BP1-201ENST00000286193 1111 ntBASIC19.46■□□□□ 0.71
CPS1P31327 OR51B5-201ENST00000300773 939 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CPS1P31327 KLK8-203ENST00000347619 555 ntTSL 2 BASIC19.46■□□□□ 0.71
CPS1P31327 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC19.46■□□□□ 0.71
CPS1P31327 RBM14-205ENST00000443702 732 ntTSL 3 BASIC19.46■□□□□ 0.71
CPS1P31327 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC19.46■□□□□ 0.71
CPS1P31327 MIR4309-201ENST00000582498 83 ntBASIC19.46■□□□□ 0.71
CPS1P31327 AC063977.2-201ENST00000601996 421 ntBASIC19.46■□□□□ 0.71
CPS1P31327 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CPS1P31327 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC19.45■□□□□ 0.7
CPS1P31327 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPS1P31327 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
CPS1P31327 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CPS1P31327 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC19.45■□□□□ 0.7
CPS1P31327 GUCY2EP-203ENST00000531117 1918 ntBASIC19.45■□□□□ 0.7
CPS1P31327 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
CPS1P31327 SFPQP1-201ENST00000446621 1786 ntBASIC19.45■□□□□ 0.7
CPS1P31327 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CPS1P31327 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CPS1P31327 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CPS1P31327 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms