Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 AC113367.3-201ENST00000508316 1912 ntBASIC13.49□□□□□ -0.25
RAB40ALP0C0E4 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 AL359881.3-201ENST00000602640 1721 ntBASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 MIR4750-201ENST00000584564 56 ntBASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 AL354702.1-201ENST00000442006 1960 ntBASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
RAB40ALP0C0E4 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 HLA-DMA-203ENST00000395305 777 ntBASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 LINC02176-201ENST00000569104 598 ntTSL 4 BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 MIR4649-201ENST00000582839 64 ntBASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 RPL17P45-201ENST00000586289 509 ntBASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 CMC2-224ENST00000630396 481 ntTSL 5 BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
RAB40ALP0C0E4 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms