Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
FREM3P0C091 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
FREM3P0C091 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.95□□□□□ -0.34
FREM3P0C091 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
FREM3P0C091 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.95□□□□□ -0.34
FREM3P0C091 AC111170.3-201ENST00000624282 2464 ntBASIC12.95□□□□□ -0.34
FREM3P0C091 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.95□□□□□ -0.34
FREM3P0C091 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
FREM3P0C091 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
FREM3P0C091 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
FREM3P0C091 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
FREM3P0C091 AP000356.3-201ENST00000382243 753 ntBASIC12.95□□□□□ -0.34
FREM3P0C091 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
FREM3P0C091 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC12.95□□□□□ -0.34
FREM3P0C091 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
FREM3P0C091 RN7SL81P-201ENST00000493781 261 ntBASIC12.95□□□□□ -0.34
FREM3P0C091 CCNC-217ENST00000523985 958 ntTSL 2 BASIC12.95□□□□□ -0.34
FREM3P0C091 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC12.95□□□□□ -0.34
FREM3P0C091 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC12.95□□□□□ -0.34
FREM3P0C091 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
FREM3P0C091 AC128714.1-201ENST00000637035 887 ntBASIC12.95□□□□□ -0.34
FREM3P0C091 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
FREM3P0C091 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
FREM3P0C091 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
FREM3P0C091 TCAM1P-207ENST00000485295 1537 ntBASIC12.95□□□□□ -0.34
FREM3P0C091 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.95□□□□□ -0.34
FREM3P0C091 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
FREM3P0C091 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC12.95□□□□□ -0.34
FREM3P0C091 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC12.95□□□□□ -0.34
FREM3P0C091 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
FREM3P0C091 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
FREM3P0C091 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC12.95□□□□□ -0.34
FREM3P0C091 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
FREM3P0C091 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
FREM3P0C091 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
FREM3P0C091 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.94□□□□□ -0.34
FREM3P0C091 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
FREM3P0C091 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
FREM3P0C091 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
FREM3P0C091 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
FREM3P0C091 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
FREM3P0C091 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.94□□□□□ -0.34
FREM3P0C091 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
FREM3P0C091 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
FREM3P0C091 RN7SL277P-201ENST00000481521 288 ntBASIC12.94□□□□□ -0.34
FREM3P0C091 TMCO5B-205ENST00000530020 894 ntBASIC12.94□□□□□ -0.34
FREM3P0C091 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
FREM3P0C091 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
FREM3P0C091 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC12.94□□□□□ -0.34
FREM3P0C091 FOS-206ENST00000555347 1280 ntTSL 2 BASIC12.94□□□□□ -0.34
FREM3P0C091 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC12.94□□□□□ -0.34
FREM3P0C091 MIR4754-201ENST00000582477 89 ntBASIC12.94□□□□□ -0.34
FREM3P0C091 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC12.94□□□□□ -0.34
FREM3P0C091 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
FREM3P0C091 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
FREM3P0C091 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
FREM3P0C091 MARK2P16-201ENST00000605714 1723 ntBASIC12.94□□□□□ -0.34
FREM3P0C091 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
FREM3P0C091 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
FREM3P0C091 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
FREM3P0C091 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
FREM3P0C091 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
FREM3P0C091 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
FREM3P0C091 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
FREM3P0C091 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
FREM3P0C091 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
FREM3P0C091 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
FREM3P0C091 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
FREM3P0C091 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
FREM3P0C091 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.94□□□□□ -0.34
FREM3P0C091 AC068587.6-202ENST00000641839 5619 ntBASIC12.94□□□□□ -0.34
FREM3P0C091 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
FREM3P0C091 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
FREM3P0C091 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
FREM3P0C091 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
FREM3P0C091 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.94□□□□□ -0.34
FREM3P0C091 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
FREM3P0C091 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
FREM3P0C091 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
FREM3P0C091 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
FREM3P0C091 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
FREM3P0C091 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
FREM3P0C091 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC12.94□□□□□ -0.34
FREM3P0C091 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
FREM3P0C091 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
FREM3P0C091 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC12.94□□□□□ -0.34
FREM3P0C091 MIR4706-201ENST00000582134 82 ntBASIC12.94□□□□□ -0.34
FREM3P0C091 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC12.94□□□□□ -0.34
FREM3P0C091 AL353726.2-201ENST00000623259 884 ntBASIC12.94□□□□□ -0.34
FREM3P0C091 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
FREM3P0C091 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
FREM3P0C091 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
FREM3P0C091 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
FREM3P0C091 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
FREM3P0C091 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
FREM3P0C091 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC12.93□□□□□ -0.34
FREM3P0C091 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC12.93□□□□□ -0.34
FREM3P0C091 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
FREM3P0C091 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC12.93□□□□□ -0.34
FREM3P0C091 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms