Protein–RNA interactions for Protein: P09110

ACAA1, 3-ketoacyl-CoA thiolase, peroxisomal, humanhuman

Predicted RBP Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1P09110 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC12.35□□□□□ -0.43
ACAA1P09110 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACAA1P09110 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACAA1P09110 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC12.35□□□□□ -0.43
ACAA1P09110 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC12.35□□□□□ -0.43
ACAA1P09110 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACAA1P09110 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACAA1P09110 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ACAA1P09110 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ACAA1P09110 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACAA1P09110 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC12.35□□□□□ -0.43
ACAA1P09110 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
ACAA1P09110 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
ACAA1P09110 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.35□□□□□ -0.43
ACAA1P09110 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC12.35□□□□□ -0.43
ACAA1P09110 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC12.35□□□□□ -0.43
ACAA1P09110 YBX1P6-201ENST00000442962 1002 ntBASIC12.35□□□□□ -0.43
ACAA1P09110 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC12.35□□□□□ -0.43
ACAA1P09110 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.35□□□□□ -0.43
ACAA1P09110 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC12.35□□□□□ -0.43
ACAA1P09110 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC12.35□□□□□ -0.43
ACAA1P09110 AC119751.2-201ENST00000504529 210 ntBASIC12.35□□□□□ -0.43
ACAA1P09110 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC12.35□□□□□ -0.43
ACAA1P09110 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12.35□□□□□ -0.43
ACAA1P09110 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC12.35□□□□□ -0.43
ACAA1P09110 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC12.35□□□□□ -0.43
ACAA1P09110 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC12.35□□□□□ -0.43
ACAA1P09110 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC12.35□□□□□ -0.43
ACAA1P09110 DUX4L45-201ENST00000566406 1057 ntBASIC12.35□□□□□ -0.43
ACAA1P09110 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC12.35□□□□□ -0.43
ACAA1P09110 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC12.35□□□□□ -0.43
ACAA1P09110 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACAA1P09110 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACAA1P09110 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
ACAA1P09110 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
ACAA1P09110 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
ACAA1P09110 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACAA1P09110 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACAA1P09110 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
ACAA1P09110 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
ACAA1P09110 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACAA1P09110 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACAA1P09110 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACAA1P09110 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACAA1P09110 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACAA1P09110 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACAA1P09110 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACAA1P09110 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.35□□□□□ -0.43
ACAA1P09110 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
ACAA1P09110 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
ACAA1P09110 KRT8P24-201ENST00000560290 1559 ntBASIC12.35□□□□□ -0.43
ACAA1P09110 AC004241.5-201ENST00000623870 2448 ntBASIC12.35□□□□□ -0.43
ACAA1P09110 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
ACAA1P09110 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ACAA1P09110 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC12.34□□□□□ -0.43
ACAA1P09110 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
ACAA1P09110 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ACAA1P09110 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
ACAA1P09110 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ACAA1P09110 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.34□□□□□ -0.43
ACAA1P09110 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ACAA1P09110 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
ACAA1P09110 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ACAA1P09110 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ACAA1P09110 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ACAA1P09110 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ACAA1P09110 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ACAA1P09110 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ACAA1P09110 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
ACAA1P09110 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.34□□□□□ -0.43
ACAA1P09110 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
ACAA1P09110 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ACAA1P09110 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ACAA1P09110 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ACAA1P09110 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ACAA1P09110 RPF1-202ENST00000370656 724 ntTSL 2 BASIC12.34□□□□□ -0.43
ACAA1P09110 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
ACAA1P09110 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC12.34□□□□□ -0.43
ACAA1P09110 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC12.34□□□□□ -0.43
ACAA1P09110 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
ACAA1P09110 FAM21FP-201ENST00000426241 1131 ntBASIC12.34□□□□□ -0.43
ACAA1P09110 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ACAA1P09110 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC12.34□□□□□ -0.43
ACAA1P09110 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ACAA1P09110 NOP2-220ENST00000545915 630 ntTSL 2 BASIC12.34□□□□□ -0.43
ACAA1P09110 AP006547.1-201ENST00000563435 692 ntBASIC12.34□□□□□ -0.43
ACAA1P09110 HNRNPA1P48-202ENST00000565308 961 ntBASIC12.34□□□□□ -0.43
ACAA1P09110 AC132192.2-201ENST00000596206 1147 ntBASIC12.34□□□□□ -0.43
ACAA1P09110 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
ACAA1P09110 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ACAA1P09110 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
ACAA1P09110 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
ACAA1P09110 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ACAA1P09110 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ACAA1P09110 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ACAA1P09110 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ACAA1P09110 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
ACAA1P09110 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ACAA1P09110 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
ACAA1P09110 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms