Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
KRT6AP02538 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KRT6AP02538 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
KRT6AP02538 FAM90A12P-201ENST00000519497 2375 ntBASIC13.92□□□□□ -0.18
KRT6AP02538 FAM90A24P-201ENST00000520792 2369 ntBASIC13.92□□□□□ -0.18
KRT6AP02538 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KRT6AP02538 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
KRT6AP02538 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
KRT6AP02538 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
KRT6AP02538 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.92□□□□□ -0.18
KRT6AP02538 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
KRT6AP02538 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.92□□□□□ -0.18
KRT6AP02538 FAM58BP-201ENST00000439056 645 ntBASIC13.92□□□□□ -0.18
KRT6AP02538 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
KRT6AP02538 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
KRT6AP02538 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
KRT6AP02538 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
KRT6AP02538 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.92□□□□□ -0.18
KRT6AP02538 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.92□□□□□ -0.18
KRT6AP02538 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.92□□□□□ -0.18
KRT6AP02538 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.92□□□□□ -0.18
KRT6AP02538 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.92□□□□□ -0.18
KRT6AP02538 AC009884.2-201ENST00000603110 324 ntBASIC13.92□□□□□ -0.18
KRT6AP02538 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
KRT6AP02538 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.92□□□□□ -0.18
KRT6AP02538 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
KRT6AP02538 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KRT6AP02538 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC13.92□□□□□ -0.18
KRT6AP02538 MIR193BHG-211ENST00000641433 5365 ntBASIC13.92□□□□□ -0.18
KRT6AP02538 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
KRT6AP02538 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
KRT6AP02538 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KRT6AP02538 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
KRT6AP02538 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
KRT6AP02538 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
KRT6AP02538 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
KRT6AP02538 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
KRT6AP02538 GPC6-201ENST00000377047 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
KRT6AP02538 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
KRT6AP02538 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
KRT6AP02538 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
KRT6AP02538 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
KRT6AP02538 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
KRT6AP02538 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
KRT6AP02538 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.92□□□□□ -0.18
KRT6AP02538 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
KRT6AP02538 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
KRT6AP02538 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KRT6AP02538 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KRT6AP02538 LINC02486-201ENST00000604157 3000 ntBASIC13.91□□□□□ -0.18
KRT6AP02538 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KRT6AP02538 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.91□□□□□ -0.18
KRT6AP02538 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KRT6AP02538 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
KRT6AP02538 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
KRT6AP02538 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KRT6AP02538 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.91□□□□□ -0.18
KRT6AP02538 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
KRT6AP02538 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KRT6AP02538 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
KRT6AP02538 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.91□□□□□ -0.18
KRT6AP02538 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KRT6AP02538 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KRT6AP02538 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KRT6AP02538 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KRT6AP02538 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.91□□□□□ -0.18
KRT6AP02538 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KRT6AP02538 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
KRT6AP02538 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
KRT6AP02538 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KRT6AP02538 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KRT6AP02538 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
KRT6AP02538 ST13P19-201ENST00000442505 1124 ntBASIC13.91□□□□□ -0.18
KRT6AP02538 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.91□□□□□ -0.18
KRT6AP02538 KLF2P4-201ENST00000451959 1225 ntBASIC13.91□□□□□ -0.18
KRT6AP02538 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC13.91□□□□□ -0.18
KRT6AP02538 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
KRT6AP02538 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KRT6AP02538 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KRT6AP02538 CR383656.12-201ENST00000549567 513 ntBASIC13.91□□□□□ -0.18
KRT6AP02538 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.91□□□□□ -0.18
KRT6AP02538 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
KRT6AP02538 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.91□□□□□ -0.18
KRT6AP02538 AC008687.7-202ENST00000637404 953 ntBASIC13.91□□□□□ -0.18
KRT6AP02538 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KRT6AP02538 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
KRT6AP02538 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KRT6AP02538 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
KRT6AP02538 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.91□□□□□ -0.18
KRT6AP02538 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.91□□□□□ -0.18
KRT6AP02538 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
KRT6AP02538 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
KRT6AP02538 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
KRT6AP02538 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KRT6AP02538 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
KRT6AP02538 AC072061.1-201ENST00000569710 2234 ntBASIC13.91□□□□□ -0.18
KRT6AP02538 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.91□□□□□ -0.18
KRT6AP02538 AC244394.1-201ENST00000435000 1665 ntBASIC13.91□□□□□ -0.18
KRT6AP02538 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC13.91□□□□□ -0.18
KRT6AP02538 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 178.4 ms