Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-AP01891 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-AP01891 AL645937.6-201ENST00000641122 3727 ntBASIC12.14□□□□□ -0.47
HLA-AP01891 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
HLA-AP01891 AC060814.4-201ENST00000594169 2163 ntBASIC12.14□□□□□ -0.47
HLA-AP01891 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
HLA-AP01891 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-AP01891 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.14□□□□□ -0.47
HLA-AP01891 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.14□□□□□ -0.47
HLA-AP01891 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-AP01891 USP17L6P-201ENST00000382470 1197 ntBASIC12.14□□□□□ -0.47
HLA-AP01891 MIR770-201ENST00000390219 98 ntBASIC12.14□□□□□ -0.47
HLA-AP01891 AL139094.1-201ENST00000405549 1188 ntBASIC12.14□□□□□ -0.47
HLA-AP01891 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.14□□□□□ -0.47
HLA-AP01891 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC12.14□□□□□ -0.47
HLA-AP01891 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
HLA-AP01891 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC12.14□□□□□ -0.47
HLA-AP01891 AC004890.2-204ENST00000481968 304 ntBASIC12.14□□□□□ -0.47
HLA-AP01891 SDHAP3-202ENST00000515467 728 ntBASIC12.14□□□□□ -0.47
HLA-AP01891 AC022616.1-201ENST00000518688 554 ntBASIC12.14□□□□□ -0.47
HLA-AP01891 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.14□□□□□ -0.47
HLA-AP01891 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC12.14□□□□□ -0.47
HLA-AP01891 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.14□□□□□ -0.47
HLA-AP01891 ZNF890P-202ENST00000530367 1156 ntBASIC12.14□□□□□ -0.47
HLA-AP01891 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC12.14□□□□□ -0.47
HLA-AP01891 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC12.14□□□□□ -0.47
HLA-AP01891 TIMM17BP1-201ENST00000545713 516 ntBASIC12.14□□□□□ -0.47
HLA-AP01891 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.14□□□□□ -0.47
HLA-AP01891 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.14□□□□□ -0.47
HLA-AP01891 AC103988.2-201ENST00000561804 725 ntBASIC12.14□□□□□ -0.47
HLA-AP01891 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC12.14□□□□□ -0.47
HLA-AP01891 AC009407.1-201ENST00000568958 598 ntBASIC12.14□□□□□ -0.47
HLA-AP01891 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.14□□□□□ -0.47
HLA-AP01891 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC12.14□□□□□ -0.47
HLA-AP01891 AC008738.7-201ENST00000609744 511 ntBASIC12.14□□□□□ -0.47
HLA-AP01891 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-AP01891 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-AP01891 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.14□□□□□ -0.47
HLA-AP01891 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC12.14□□□□□ -0.47
HLA-AP01891 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-AP01891 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-AP01891 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-AP01891 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-AP01891 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-AP01891 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-AP01891 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
HLA-AP01891 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.14□□□□□ -0.47
HLA-AP01891 AC004623.1-201ENST00000624592 2127 ntBASIC12.14□□□□□ -0.47
HLA-AP01891 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC12.14□□□□□ -0.47
HLA-AP01891 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-AP01891 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-AP01891 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-AP01891 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-AP01891 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-AP01891 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-AP01891 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-AP01891 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-AP01891 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
HLA-AP01891 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
HLA-AP01891 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
HLA-AP01891 AL022323.5-201ENST00000624101 2059 ntBASIC12.14□□□□□ -0.47
HLA-AP01891 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-AP01891 PCDHB19P-202ENST00000625133 2914 ntBASIC12.14□□□□□ -0.47
HLA-AP01891 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
HLA-AP01891 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-AP01891 AC022144.1-201ENST00000602255 1580 ntBASIC12.13□□□□□ -0.47
HLA-AP01891 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.13□□□□□ -0.47
HLA-AP01891 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-AP01891 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-AP01891 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-AP01891 SPTSSB-201ENST00000359175 3103 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-AP01891 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC12.13□□□□□ -0.47
HLA-AP01891 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-AP01891 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-AP01891 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-AP01891 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-AP01891 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-AP01891 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-AP01891 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC12.13□□□□□ -0.47
HLA-AP01891 DRD5P1-201ENST00000456605 1438 ntBASIC12.13□□□□□ -0.47
HLA-AP01891 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-AP01891 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
HLA-AP01891 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-AP01891 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-AP01891 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-AP01891 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
HLA-AP01891 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
HLA-AP01891 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC12.13□□□□□ -0.47
HLA-AP01891 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-AP01891 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-AP01891 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
HLA-AP01891 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC12.13□□□□□ -0.47
HLA-AP01891 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-AP01891 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
HLA-AP01891 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC12.13□□□□□ -0.47
HLA-AP01891 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.13□□□□□ -0.47
HLA-AP01891 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.13□□□□□ -0.47
HLA-AP01891 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.13□□□□□ -0.47
HLA-AP01891 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
HLA-AP01891 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms