Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
IFNA1P01562 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
IFNA1P01562 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC11.34□□□□□ -0.59
IFNA1P01562 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
IFNA1P01562 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
IFNA1P01562 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
IFNA1P01562 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
IFNA1P01562 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
IFNA1P01562 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
IFNA1P01562 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC11.34□□□□□ -0.59
IFNA1P01562 MPV17-208ENST00000405076 603 ntTSL 5 BASIC11.34□□□□□ -0.59
IFNA1P01562 SERF2-209ENST00000409646 559 ntTSL 4 BASIC11.34□□□□□ -0.59
IFNA1P01562 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC11.34□□□□□ -0.59
IFNA1P01562 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
IFNA1P01562 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC11.34□□□□□ -0.59
IFNA1P01562 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
IFNA1P01562 RNF146-204ENST00000476956 884 ntTSL 2 BASIC11.34□□□□□ -0.59
IFNA1P01562 GATB-205ENST00000508611 605 ntTSL 2 BASIC11.34□□□□□ -0.59
IFNA1P01562 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC11.34□□□□□ -0.59
IFNA1P01562 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC11.34□□□□□ -0.59
IFNA1P01562 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
IFNA1P01562 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC11.34□□□□□ -0.59
IFNA1P01562 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
IFNA1P01562 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
IFNA1P01562 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
IFNA1P01562 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC11.34□□□□□ -0.59
IFNA1P01562 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC11.34□□□□□ -0.59
IFNA1P01562 AC103988.2-201ENST00000561804 725 ntBASIC11.34□□□□□ -0.59
IFNA1P01562 SLC25A6P4-201ENST00000586535 553 ntBASIC11.34□□□□□ -0.59
IFNA1P01562 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC11.34□□□□□ -0.59
IFNA1P01562 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
IFNA1P01562 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC11.34□□□□□ -0.59
IFNA1P01562 AL603764.1-201ENST00000636452 321 ntBASIC11.34□□□□□ -0.59
IFNA1P01562 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
IFNA1P01562 AL033527.5-202ENST00000641632 1098 ntBASIC11.34□□□□□ -0.59
IFNA1P01562 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
IFNA1P01562 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
IFNA1P01562 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC11.34□□□□□ -0.59
IFNA1P01562 AC002350.2-201ENST00000623894 1828 ntBASIC11.34□□□□□ -0.59
IFNA1P01562 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
IFNA1P01562 NPTN-IT1-201ENST00000628401 2283 ntBASIC11.34□□□□□ -0.59
IFNA1P01562 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
IFNA1P01562 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
IFNA1P01562 SLC4A2-201ENST00000392826 3947 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
IFNA1P01562 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
IFNA1P01562 PCDH12-201ENST00000231484 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
IFNA1P01562 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
IFNA1P01562 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
IFNA1P01562 AC139712.1-201ENST00000378256 1875 ntBASIC11.34□□□□□ -0.59
IFNA1P01562 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
IFNA1P01562 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.59
IFNA1P01562 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC11.33□□□□□ -0.59
IFNA1P01562 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
IFNA1P01562 AC004623.1-201ENST00000624592 2127 ntBASIC11.33□□□□□ -0.6
IFNA1P01562 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
IFNA1P01562 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
IFNA1P01562 SEC31A-208ENST00000448323 4255 ntAPPRIS P4 TSL 5 BASIC11.33□□□□□ -0.6
IFNA1P01562 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC11.33□□□□□ -0.6
IFNA1P01562 AL022313.4-201ENST00000562756 2046 ntBASIC11.33□□□□□ -0.6
IFNA1P01562 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC11.33□□□□□ -0.6
IFNA1P01562 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
IFNA1P01562 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
IFNA1P01562 DPY19L1-201ENST00000310974 4870 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
IFNA1P01562 PER3-202ENST00000377532 6279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
IFNA1P01562 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
IFNA1P01562 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
IFNA1P01562 DAAM2-208ENST00000538976 6247 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
IFNA1P01562 TIAF1-201ENST00000359450 5337 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
IFNA1P01562 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC11.33□□□□□ -0.6
IFNA1P01562 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
IFNA1P01562 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC11.33□□□□□ -0.6
IFNA1P01562 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC11.33□□□□□ -0.6
IFNA1P01562 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
IFNA1P01562 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC11.33□□□□□ -0.6
IFNA1P01562 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC11.33□□□□□ -0.6
IFNA1P01562 AL079307.3-201ENST00000556114 283 ntBASIC11.33□□□□□ -0.6
IFNA1P01562 VPS18-202ENST00000558474 873 ntTSL 3 BASIC11.33□□□□□ -0.6
IFNA1P01562 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC11.33□□□□□ -0.6
IFNA1P01562 DUX4L47-201ENST00000566374 394 ntBASIC11.33□□□□□ -0.6
IFNA1P01562 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC11.33□□□□□ -0.6
IFNA1P01562 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC11.33□□□□□ -0.6
IFNA1P01562 TMX1-201ENST00000457354 3995 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
IFNA1P01562 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC11.33□□□□□ -0.6
IFNA1P01562 PDIA3P1-201ENST00000471856 1510 ntBASIC11.33□□□□□ -0.6
IFNA1P01562 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC11.33□□□□□ -0.6
IFNA1P01562 FREM3-201ENST00000329798 6729 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
IFNA1P01562 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
IFNA1P01562 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
IFNA1P01562 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC11.33□□□□□ -0.6
IFNA1P01562 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
IFNA1P01562 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC11.33□□□□□ -0.6
IFNA1P01562 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC11.33□□□□□ -0.6
IFNA1P01562 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
IFNA1P01562 TCF21-202ENST00000367882 4551 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
IFNA1P01562 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
IFNA1P01562 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
IFNA1P01562 HAS3-202ENST00000306560 4220 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
IFNA1P01562 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
IFNA1P01562 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
IFNA1P01562 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms