Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 LINC01165-201ENST00000445190 1623 ntBASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 AC090643.2-201ENST00000623442 2029 ntBASIC14.48□□□□□ -0.09
RAI2Q9Y5P3 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 AC008132.1-202ENST00000342005 1389 ntBASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 MST1P2-201ENST00000457982 2291 ntBASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 AC239868.1-201ENST00000369385 493 ntBASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 ACTG1P2-201ENST00000415776 1125 ntBASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 ACTG1P11-201ENST00000425411 1125 ntBASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 RN7SL277P-201ENST00000481521 288 ntBASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC14.47□□□□□ -0.09
RAI2Q9Y5P3 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAI2Q9Y5P3 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAI2Q9Y5P3 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAI2Q9Y5P3 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.46□□□□□ -0.09
RAI2Q9Y5P3 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
RAI2Q9Y5P3 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
RAI2Q9Y5P3 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAI2Q9Y5P3 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAI2Q9Y5P3 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.46□□□□□ -0.09
RAI2Q9Y5P3 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAI2Q9Y5P3 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAI2Q9Y5P3 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAI2Q9Y5P3 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAI2Q9Y5P3 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAI2Q9Y5P3 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAI2Q9Y5P3 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAI2Q9Y5P3 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAI2Q9Y5P3 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAI2Q9Y5P3 RNA5SP359-201ENST00000364838 113 ntBASIC14.46□□□□□ -0.09
RAI2Q9Y5P3 IGLJ3-201ENST00000390324 176 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
RAI2Q9Y5P3 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAI2Q9Y5P3 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.46□□□□□ -0.09
RAI2Q9Y5P3 AL596276.2-201ENST00000447525 331 ntBASIC14.46□□□□□ -0.09
RAI2Q9Y5P3 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC14.46□□□□□ -0.09
RAI2Q9Y5P3 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAI2Q9Y5P3 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms