Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
HDAC6Q9UBN7 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 HPGD-203ENST00000422112 805 ntTSL 2 BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 RPSAP15-201ENST00000448168 861 ntBASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 AC135983.4-201ENST00000564116 1262 ntBASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 SIGLEC18P-201ENST00000602271 909 ntBASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 AC009093.10-201ENST00000641956 1442 ntBASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 KRT18P9-201ENST00000604826 1300 ntBASIC16.19■□□□□ 0.18
HDAC6Q9UBN7 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
HDAC6Q9UBN7 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
HDAC6Q9UBN7 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
HDAC6Q9UBN7 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HDAC6Q9UBN7 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HDAC6Q9UBN7 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HDAC6Q9UBN7 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.18■□□□□ 0.18
HDAC6Q9UBN7 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HDAC6Q9UBN7 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HDAC6Q9UBN7 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC16.18■□□□□ 0.18
HDAC6Q9UBN7 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
HDAC6Q9UBN7 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HDAC6Q9UBN7 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
HDAC6Q9UBN7 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HDAC6Q9UBN7 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HDAC6Q9UBN7 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
HDAC6Q9UBN7 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC16.18■□□□□ 0.18
HDAC6Q9UBN7 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HDAC6Q9UBN7 APP-205ENST00000358918 2366 ntTSL 5 BASIC16.18■□□□□ 0.18
HDAC6Q9UBN7 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
HDAC6Q9UBN7 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HDAC6Q9UBN7 MIR557-201ENST00000385239 98 ntBASIC16.18■□□□□ 0.18
HDAC6Q9UBN7 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
HDAC6Q9UBN7 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HDAC6Q9UBN7 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HDAC6Q9UBN7 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC16.18■□□□□ 0.18
HDAC6Q9UBN7 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC16.18■□□□□ 0.18
HDAC6Q9UBN7 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
HDAC6Q9UBN7 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HDAC6Q9UBN7 RN7SL8P-201ENST00000461771 266 ntBASIC16.18■□□□□ 0.18
HDAC6Q9UBN7 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC16.18■□□□□ 0.18
HDAC6Q9UBN7 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HDAC6Q9UBN7 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC16.18■□□□□ 0.18
HDAC6Q9UBN7 AP002803.1-201ENST00000528836 498 ntBASIC16.18■□□□□ 0.18
HDAC6Q9UBN7 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms