Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.54□□□□□ -0.08
HACD3Q9P035 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HACD3Q9P035 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HACD3Q9P035 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
HACD3Q9P035 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.54□□□□□ -0.08
HACD3Q9P035 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HACD3Q9P035 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HACD3Q9P035 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.54□□□□□ -0.08
HACD3Q9P035 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
HACD3Q9P035 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
HACD3Q9P035 USP17L6P-201ENST00000382470 1197 ntBASIC14.54□□□□□ -0.08
HACD3Q9P035 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.54□□□□□ -0.08
HACD3Q9P035 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.54□□□□□ -0.08
HACD3Q9P035 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HACD3Q9P035 AC106794.1-201ENST00000506935 792 ntBASIC14.54□□□□□ -0.08
HACD3Q9P035 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.54□□□□□ -0.08
HACD3Q9P035 AC003686.1-201ENST00000550956 1034 ntBASIC14.54□□□□□ -0.08
HACD3Q9P035 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
HACD3Q9P035 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC14.54□□□□□ -0.08
HACD3Q9P035 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC14.54□□□□□ -0.08
HACD3Q9P035 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.54□□□□□ -0.08
HACD3Q9P035 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
HACD3Q9P035 AC022748.3-201ENST00000621828 275 ntBASIC14.54□□□□□ -0.08
HACD3Q9P035 AL591471.1-201ENST00000621855 229 ntBASIC14.54□□□□□ -0.08
HACD3Q9P035 AC090386.2-201ENST00000623010 1039 ntBASIC14.54□□□□□ -0.08
HACD3Q9P035 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HACD3Q9P035 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
HACD3Q9P035 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HACD3Q9P035 AC004899.1-201ENST00000424687 1714 ntBASIC14.54□□□□□ -0.08
HACD3Q9P035 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
HACD3Q9P035 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.54□□□□□ -0.08
HACD3Q9P035 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HACD3Q9P035 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
HACD3Q9P035 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.54□□□□□ -0.08
HACD3Q9P035 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
HACD3Q9P035 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
HACD3Q9P035 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HACD3Q9P035 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
HACD3Q9P035 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HACD3Q9P035 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
HACD3Q9P035 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HACD3Q9P035 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HACD3Q9P035 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HACD3Q9P035 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HACD3Q9P035 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
HACD3Q9P035 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HACD3Q9P035 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.53□□□□□ -0.08
HACD3Q9P035 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
HACD3Q9P035 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
HACD3Q9P035 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
HACD3Q9P035 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
HACD3Q9P035 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HACD3Q9P035 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HACD3Q9P035 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
HACD3Q9P035 CYP4F23P-201ENST00000593402 1579 ntBASIC14.53□□□□□ -0.08
HACD3Q9P035 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
HACD3Q9P035 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HACD3Q9P035 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.53□□□□□ -0.08
HACD3Q9P035 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HACD3Q9P035 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HACD3Q9P035 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.53□□□□□ -0.08
HACD3Q9P035 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HACD3Q9P035 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HACD3Q9P035 VDAC1P1-201ENST00000439229 848 ntBASIC14.53□□□□□ -0.08
HACD3Q9P035 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.53□□□□□ -0.08
HACD3Q9P035 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.53□□□□□ -0.08
HACD3Q9P035 HLA-J-204ENST00000495278 958 ntBASIC14.53□□□□□ -0.08
HACD3Q9P035 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.53□□□□□ -0.08
HACD3Q9P035 AC022217.1-201ENST00000521069 738 ntBASIC14.53□□□□□ -0.08
HACD3Q9P035 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.53□□□□□ -0.08
HACD3Q9P035 AC126915.1-201ENST00000522847 1038 ntBASIC14.53□□□□□ -0.08
HACD3Q9P035 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HACD3Q9P035 AGER-214ENST00000538695 487 ntTSL 2 BASIC14.53□□□□□ -0.08
HACD3Q9P035 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.53□□□□□ -0.08
HACD3Q9P035 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.53□□□□□ -0.08
HACD3Q9P035 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.53□□□□□ -0.08
HACD3Q9P035 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC14.53□□□□□ -0.08
HACD3Q9P035 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HACD3Q9P035 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.53□□□□□ -0.08
HACD3Q9P035 AC004923.1-202ENST00000642106 209 ntBASIC14.53□□□□□ -0.08
HACD3Q9P035 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
HACD3Q9P035 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HACD3Q9P035 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
HACD3Q9P035 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HACD3Q9P035 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC14.53□□□□□ -0.08
HACD3Q9P035 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
HACD3Q9P035 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
HACD3Q9P035 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HACD3Q9P035 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HACD3Q9P035 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.53□□□□□ -0.08
HACD3Q9P035 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.53□□□□□ -0.08
HACD3Q9P035 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
HACD3Q9P035 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HACD3Q9P035 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
HACD3Q9P035 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
HACD3Q9P035 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
HACD3Q9P035 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
HACD3Q9P035 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
HACD3Q9P035 MIR193BHG-211ENST00000641433 5365 ntBASIC14.52□□□□□ -0.08
HACD3Q9P035 HADH-202ENST00000403312 1752 ntTSL 5 BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms