Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNED1Q8TER0 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNED1Q8TER0 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SNED1Q8TER0 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNED1Q8TER0 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNED1Q8TER0 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
SNED1Q8TER0 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNED1Q8TER0 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.96■□□□□ 0.31
SNED1Q8TER0 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNED1Q8TER0 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNED1Q8TER0 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SNED1Q8TER0 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
SNED1Q8TER0 AC015802.1-201ENST00000588104 1449 ntBASIC16.96■□□□□ 0.3
SNED1Q8TER0 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SNED1Q8TER0 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SNED1Q8TER0 AC005722.1-201ENST00000431878 964 ntBASIC16.96■□□□□ 0.3
SNED1Q8TER0 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC16.96■□□□□ 0.3
SNED1Q8TER0 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC16.96■□□□□ 0.3
SNED1Q8TER0 TBC1D3P6-201ENST00000505954 962 ntBASIC16.96■□□□□ 0.3
SNED1Q8TER0 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SNED1Q8TER0 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SNED1Q8TER0 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC16.96■□□□□ 0.3
SNED1Q8TER0 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC16.96■□□□□ 0.3
SNED1Q8TER0 AC105133.1-201ENST00000559749 742 ntTSL 3 BASIC16.96■□□□□ 0.3
SNED1Q8TER0 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC16.96■□□□□ 0.3
SNED1Q8TER0 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC16.96■□□□□ 0.3
SNED1Q8TER0 NEK4P3-201ENST00000604859 544 ntBASIC16.96■□□□□ 0.3
SNED1Q8TER0 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SNED1Q8TER0 LINC00552-201ENST00000625151 2579 ntBASIC16.95■□□□□ 0.3
SNED1Q8TER0 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC16.95■□□□□ 0.3
SNED1Q8TER0 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SNED1Q8TER0 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SNED1Q8TER0 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SNED1Q8TER0 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNED1Q8TER0 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNED1Q8TER0 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNED1Q8TER0 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SNED1Q8TER0 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNED1Q8TER0 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SNED1Q8TER0 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNED1Q8TER0 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.95■□□□□ 0.3
SNED1Q8TER0 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNED1Q8TER0 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNED1Q8TER0 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNED1Q8TER0 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SNED1Q8TER0 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNED1Q8TER0 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.95■□□□□ 0.3
SNED1Q8TER0 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNED1Q8TER0 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNED1Q8TER0 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNED1Q8TER0 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNED1Q8TER0 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNED1Q8TER0 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNED1Q8TER0 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNED1Q8TER0 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNED1Q8TER0 IL18BP-206ENST00000393707 1037 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SNED1Q8TER0 U73169.1-201ENST00000395152 367 ntBASIC16.95■□□□□ 0.3
SNED1Q8TER0 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC16.95■□□□□ 0.3
SNED1Q8TER0 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC16.95■□□□□ 0.3
SNED1Q8TER0 RNA5SP420-201ENST00000516997 137 ntBASIC16.95■□□□□ 0.3
SNED1Q8TER0 SRPK2P-201ENST00000523408 1100 ntBASIC16.95■□□□□ 0.3
SNED1Q8TER0 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC16.95■□□□□ 0.3
SNED1Q8TER0 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC16.95■□□□□ 0.3
SNED1Q8TER0 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNED1Q8TER0 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC16.95■□□□□ 0.3
SNED1Q8TER0 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC16.95■□□□□ 0.3
SNED1Q8TER0 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNED1Q8TER0 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNED1Q8TER0 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.95■□□□□ 0.3
SNED1Q8TER0 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SNED1Q8TER0 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SNED1Q8TER0 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.95■□□□□ 0.3
SNED1Q8TER0 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC16.94■□□□□ 0.3
SNED1Q8TER0 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNED1Q8TER0 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNED1Q8TER0 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SNED1Q8TER0 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNED1Q8TER0 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
SNED1Q8TER0 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNED1Q8TER0 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNED1Q8TER0 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SNED1Q8TER0 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNED1Q8TER0 AC106881.1-201ENST00000605849 3329 ntBASIC16.94■□□□□ 0.3
SNED1Q8TER0 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
SNED1Q8TER0 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC16.94■□□□□ 0.3
SNED1Q8TER0 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.94■□□□□ 0.3
SNED1Q8TER0 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
SNED1Q8TER0 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SNED1Q8TER0 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.94■□□□□ 0.3
SNED1Q8TER0 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
SNED1Q8TER0 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SNED1Q8TER0 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SNED1Q8TER0 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
SNED1Q8TER0 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC16.94■□□□□ 0.3
SNED1Q8TER0 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC16.94■□□□□ 0.3
SNED1Q8TER0 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC16.94■□□□□ 0.3
SNED1Q8TER0 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC16.94■□□□□ 0.3
SNED1Q8TER0 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC16.94■□□□□ 0.3
SNED1Q8TER0 DHDDS-217ENST00000526219 1072 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
SNED1Q8TER0 AP003040.1-201ENST00000532044 1024 ntBASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms