Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC16.49■□□□□ 0.23
SHROOM1Q2M3G4 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHROOM1Q2M3G4 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHROOM1Q2M3G4 AC005912.2-201ENST00000619492 2400 ntBASIC16.49■□□□□ 0.23
SHROOM1Q2M3G4 MST1P2-201ENST00000457982 2291 ntBASIC16.49■□□□□ 0.23
SHROOM1Q2M3G4 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHROOM1Q2M3G4 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHROOM1Q2M3G4 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC16.49■□□□□ 0.23
SHROOM1Q2M3G4 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHROOM1Q2M3G4 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SHROOM1Q2M3G4 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHROOM1Q2M3G4 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
SHROOM1Q2M3G4 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHROOM1Q2M3G4 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
SHROOM1Q2M3G4 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC16.48■□□□□ 0.23
SHROOM1Q2M3G4 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
SHROOM1Q2M3G4 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC16.48■□□□□ 0.23
SHROOM1Q2M3G4 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHROOM1Q2M3G4 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHROOM1Q2M3G4 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHROOM1Q2M3G4 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHROOM1Q2M3G4 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SHROOM1Q2M3G4 DUT-208ENST00000559540 1441 ntTSL 2 BASIC16.48■□□□□ 0.23
SHROOM1Q2M3G4 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC16.48■□□□□ 0.23
SHROOM1Q2M3G4 GNG10P1-201ENST00000452289 199 ntBASIC16.48■□□□□ 0.23
SHROOM1Q2M3G4 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SHROOM1Q2M3G4 AC025186.1-201ENST00000478174 870 ntBASIC16.48■□□□□ 0.23
SHROOM1Q2M3G4 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC16.48■□□□□ 0.23
SHROOM1Q2M3G4 OR2A1-AS1-210ENST00000496968 531 ntBASIC16.48■□□□□ 0.23
SHROOM1Q2M3G4 PRSS3P1-201ENST00000503996 742 ntBASIC16.48■□□□□ 0.23
SHROOM1Q2M3G4 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC16.48■□□□□ 0.23
SHROOM1Q2M3G4 THY1-209ENST00000580275 578 ntTSL 3 BASIC16.48■□□□□ 0.23
SHROOM1Q2M3G4 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
SHROOM1Q2M3G4 AL009176.1-201ENST00000607876 650 ntBASIC16.48■□□□□ 0.23
SHROOM1Q2M3G4 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SHROOM1Q2M3G4 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC16.48■□□□□ 0.23
SHROOM1Q2M3G4 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHROOM1Q2M3G4 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
SHROOM1Q2M3G4 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC16.48■□□□□ 0.23
SHROOM1Q2M3G4 BX640514.1-201ENST00000583223 1918 ntBASIC16.48■□□□□ 0.23
SHROOM1Q2M3G4 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHROOM1Q2M3G4 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHROOM1Q2M3G4 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SHROOM1Q2M3G4 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC16.48■□□□□ 0.23
SHROOM1Q2M3G4 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC16.48■□□□□ 0.23
SHROOM1Q2M3G4 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.48■□□□□ 0.23
SHROOM1Q2M3G4 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SHROOM1Q2M3G4 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
SHROOM1Q2M3G4 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.48■□□□□ 0.23
SHROOM1Q2M3G4 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SHROOM1Q2M3G4 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 CTBP2P8-201ENST00000422584 1330 ntBASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 AC117503.4-201ENST00000623229 1418 ntBASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 ACTG1P19-201ENST00000418987 1116 ntBASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 AC138466.4-201ENST00000623965 852 ntBASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 AC020910.6-201ENST00000623084 1459 ntBASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SHROOM1Q2M3G4 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SHROOM1Q2M3G4 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 68.3 ms