Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.12□□□□□ -0.47
SSBP1Q04837 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SSBP1Q04837 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC12.12□□□□□ -0.47
SSBP1Q04837 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP1Q04837 SMG6-203ENST00000536871 1865 ntTSL 2 BASIC12.12□□□□□ -0.47
SSBP1Q04837 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP1Q04837 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP1Q04837 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP1Q04837 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SSBP1Q04837 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC12.12□□□□□ -0.47
SSBP1Q04837 PCDHA6-201ENST00000378126 3267 ntBASIC12.12□□□□□ -0.47
SSBP1Q04837 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.12□□□□□ -0.47
SSBP1Q04837 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.11□□□□□ -0.47
SSBP1Q04837 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP1Q04837 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP1Q04837 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC12.11□□□□□ -0.47
SSBP1Q04837 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP1Q04837 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP1Q04837 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC12.11□□□□□ -0.47
SSBP1Q04837 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.11□□□□□ -0.47
SSBP1Q04837 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP1Q04837 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP1Q04837 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP1Q04837 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP1Q04837 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP1Q04837 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP1Q04837 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP1Q04837 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.11□□□□□ -0.47
SSBP1Q04837 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.11□□□□□ -0.47
SSBP1Q04837 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.11□□□□□ -0.47
SSBP1Q04837 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP1Q04837 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP1Q04837 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC12.11□□□□□ -0.47
SSBP1Q04837 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
SSBP1Q04837 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
SSBP1Q04837 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP1Q04837 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP1Q04837 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP1Q04837 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP1Q04837 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP1Q04837 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
SSBP1Q04837 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP1Q04837 HNRNPFP1-201ENST00000391730 1133 ntBASIC12.11□□□□□ -0.47
SSBP1Q04837 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP1Q04837 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.11□□□□□ -0.47
SSBP1Q04837 AC092580.3-201ENST00000430932 139 ntBASIC12.11□□□□□ -0.47
SSBP1Q04837 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC12.11□□□□□ -0.47
SSBP1Q04837 FDX1P1-201ENST00000449115 551 ntBASIC12.11□□□□□ -0.47
SSBP1Q04837 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC12.11□□□□□ -0.47
SSBP1Q04837 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC12.11□□□□□ -0.47
SSBP1Q04837 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.11□□□□□ -0.47
SSBP1Q04837 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP1Q04837 AC104596.2-201ENST00000512793 793 ntBASIC12.11□□□□□ -0.47
SSBP1Q04837 TPRX2P-201ENST00000535362 881 ntBASIC12.11□□□□□ -0.47
SSBP1Q04837 AC135586.1-201ENST00000539323 574 ntBASIC12.11□□□□□ -0.47
SSBP1Q04837 AL512310.5-201ENST00000551999 515 ntBASIC12.11□□□□□ -0.47
SSBP1Q04837 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC12.11□□□□□ -0.47
SSBP1Q04837 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.11□□□□□ -0.47
SSBP1Q04837 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.11□□□□□ -0.47
SSBP1Q04837 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC12.11□□□□□ -0.47
SSBP1Q04837 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.11□□□□□ -0.47
SSBP1Q04837 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC12.11□□□□□ -0.47
SSBP1Q04837 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
SSBP1Q04837 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP1Q04837 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.11□□□□□ -0.47
SSBP1Q04837 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.11□□□□□ -0.47
SSBP1Q04837 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC12.11□□□□□ -0.47
SSBP1Q04837 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP1Q04837 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC12.11□□□□□ -0.47
SSBP1Q04837 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC12.11□□□□□ -0.47
SSBP1Q04837 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP1Q04837 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP1Q04837 SHC1P1-201ENST00000425230 1745 ntBASIC12.11□□□□□ -0.47
SSBP1Q04837 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC12.11□□□□□ -0.47
SSBP1Q04837 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP1Q04837 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP1Q04837 AP003969.2-201ENST00000623739 2275 ntBASIC12.11□□□□□ -0.47
SSBP1Q04837 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP1Q04837 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP1Q04837 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC12.11□□□□□ -0.47
SSBP1Q04837 RPS15A-213ENST00000576436 2190 ntTSL 4 BASIC12.11□□□□□ -0.47
SSBP1Q04837 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SSBP1Q04837 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP1Q04837 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.1□□□□□ -0.47
SSBP1Q04837 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP1Q04837 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
SSBP1Q04837 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SSBP1Q04837 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
SSBP1Q04837 AC022364.1-202ENST00000617468 2409 ntBASIC12.1□□□□□ -0.47
SSBP1Q04837 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC12.1□□□□□ -0.47
SSBP1Q04837 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP1Q04837 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP1Q04837 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP1Q04837 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.1□□□□□ -0.47
SSBP1Q04837 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP1Q04837 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
SSBP1Q04837 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP1Q04837 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
SSBP1Q04837 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC12.1□□□□□ -0.47
SSBP1Q04837 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms