Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CACNA1BQ00975 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CACNA1BQ00975 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CACNA1BQ00975 PLA2G12B-201ENST00000373032 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CACNA1BQ00975 MIR632-201ENST00000385193 94 ntBASIC13.04□□□□□ -0.32
CACNA1BQ00975 AL391903.1-201ENST00000407513 365 ntBASIC13.04□□□□□ -0.32
CACNA1BQ00975 CAPG-204ENST00000409724 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CACNA1BQ00975 AL359182.1-201ENST00000435915 469 ntTSL 3 BASIC13.04□□□□□ -0.32
CACNA1BQ00975 AC113398.1-201ENST00000464124 406 ntBASIC13.04□□□□□ -0.32
CACNA1BQ00975 AC022447.2-201ENST00000509750 543 ntTSL 3 BASIC13.04□□□□□ -0.32
CACNA1BQ00975 AC100858.1-201ENST00000514059 1228 ntBASIC13.04□□□□□ -0.32
CACNA1BQ00975 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC13.04□□□□□ -0.32
CACNA1BQ00975 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC13.04□□□□□ -0.32
CACNA1BQ00975 AC010601.1-201ENST00000569048 446 ntTSL 5 BASIC13.04□□□□□ -0.32
CACNA1BQ00975 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC13.04□□□□□ -0.32
CACNA1BQ00975 AC010531.7-201ENST00000602665 465 ntTSL 3 BASIC13.04□□□□□ -0.32
CACNA1BQ00975 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CACNA1BQ00975 FURIN-208ENST00000640725 224 ntTSL 5 BASIC13.04□□□□□ -0.32
CACNA1BQ00975 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CACNA1BQ00975 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CACNA1BQ00975 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CACNA1BQ00975 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CACNA1BQ00975 PCDHA14-201ENST00000506751 2298 ntBASIC13.03□□□□□ -0.32
CACNA1BQ00975 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CACNA1BQ00975 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.03□□□□□ -0.32
CACNA1BQ00975 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC13.03□□□□□ -0.32
CACNA1BQ00975 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CACNA1BQ00975 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC13.03□□□□□ -0.32
CACNA1BQ00975 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CACNA1BQ00975 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CACNA1BQ00975 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.03□□□□□ -0.32
CACNA1BQ00975 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CACNA1BQ00975 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CACNA1BQ00975 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CACNA1BQ00975 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CACNA1BQ00975 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.03□□□□□ -0.32
CACNA1BQ00975 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CACNA1BQ00975 KIR2DL1-201ENST00000291633 1203 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CACNA1BQ00975 SGCA-202ENST00000344627 1057 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CACNA1BQ00975 NRSN1-201ENST00000378475 800 ntTSL 3 BASIC13.03□□□□□ -0.32
CACNA1BQ00975 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
CACNA1BQ00975 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CACNA1BQ00975 PHBP3-201ENST00000412562 819 ntBASIC13.03□□□□□ -0.32
CACNA1BQ00975 RN7SL794P-201ENST00000469816 280 ntBASIC13.03□□□□□ -0.32
CACNA1BQ00975 TBC1D3P6-201ENST00000505954 962 ntBASIC13.03□□□□□ -0.32
CACNA1BQ00975 AC126755.5-201ENST00000622756 267 ntBASIC13.03□□□□□ -0.32
CACNA1BQ00975 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CACNA1BQ00975 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CACNA1BQ00975 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CACNA1BQ00975 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CACNA1BQ00975 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CACNA1BQ00975 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
CACNA1BQ00975 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.03□□□□□ -0.32
CACNA1BQ00975 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CACNA1BQ00975 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CACNA1BQ00975 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CACNA1BQ00975 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CACNA1BQ00975 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.03□□□□□ -0.32
CACNA1BQ00975 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CACNA1BQ00975 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CACNA1BQ00975 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CACNA1BQ00975 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CACNA1BQ00975 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CACNA1BQ00975 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CACNA1BQ00975 MB-204ENST00000401702 1043 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CACNA1BQ00975 DNM1P46-202ENST00000415963 882 ntBASIC13.02□□□□□ -0.32
CACNA1BQ00975 SWI5-204ENST00000419867 1048 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CACNA1BQ00975 LINC01508-201ENST00000425666 1013 ntTSL 3 BASIC13.02□□□□□ -0.32
CACNA1BQ00975 AL356289.1-203ENST00000439795 789 ntTSL 5 BASIC13.02□□□□□ -0.32
CACNA1BQ00975 PLA2G6-213ENST00000447598 567 ntTSL 5 BASIC13.02□□□□□ -0.32
CACNA1BQ00975 AC145285.1-201ENST00000469929 694 ntBASIC13.02□□□□□ -0.32
CACNA1BQ00975 AP005264.5-201ENST00000590066 467 ntBASIC13.02□□□□□ -0.32
CACNA1BQ00975 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CACNA1BQ00975 ZNF415-221ENST00000600574 563 ntTSL 3 BASIC13.02□□□□□ -0.32
CACNA1BQ00975 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
CACNA1BQ00975 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CACNA1BQ00975 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
CACNA1BQ00975 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CACNA1BQ00975 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.02□□□□□ -0.32
CACNA1BQ00975 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CACNA1BQ00975 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CACNA1BQ00975 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
CACNA1BQ00975 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
CACNA1BQ00975 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
CACNA1BQ00975 CICP13-201ENST00000422015 2789 ntBASIC13.02□□□□□ -0.32
CACNA1BQ00975 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
CACNA1BQ00975 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CACNA1BQ00975 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CACNA1BQ00975 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
CACNA1BQ00975 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.02□□□□□ -0.33
CACNA1BQ00975 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CACNA1BQ00975 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CACNA1BQ00975 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.33
CACNA1BQ00975 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
CACNA1BQ00975 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CACNA1BQ00975 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.02□□□□□ -0.33
CACNA1BQ00975 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CACNA1BQ00975 NDUFB11-201ENST00000276062 948 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CACNA1BQ00975 POLR2G-201ENST00000301788 827 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CACNA1BQ00975 OR6N1-201ENST00000335094 1027 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms