Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN6P56747 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.69□□□□□ -0.22
CLDN6P56747 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN6P56747 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN6P56747 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN6P56747 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CLDN6P56747 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.69□□□□□ -0.22
CLDN6P56747 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN6P56747 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN6P56747 CCL5-201ENST00000603197 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN6P56747 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN6P56747 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.69□□□□□ -0.22
CLDN6P56747 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN6P56747 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.69□□□□□ -0.22
CLDN6P56747 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.69□□□□□ -0.22
CLDN6P56747 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
CLDN6P56747 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN6P56747 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN6P56747 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
CLDN6P56747 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.68□□□□□ -0.22
CLDN6P56747 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
CLDN6P56747 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN6P56747 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN6P56747 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN6P56747 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CLDN6P56747 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN6P56747 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN6P56747 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC13.68□□□□□ -0.22
CLDN6P56747 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CLDN6P56747 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
CLDN6P56747 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN6P56747 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN6P56747 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN6P56747 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN6P56747 SURF4-203ENST00000371991 715 ntTSL 3 BASIC13.68□□□□□ -0.22
CLDN6P56747 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN6P56747 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN6P56747 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC13.68□□□□□ -0.22
CLDN6P56747 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC13.68□□□□□ -0.22
CLDN6P56747 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC13.68□□□□□ -0.22
CLDN6P56747 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC13.68□□□□□ -0.22
CLDN6P56747 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC13.68□□□□□ -0.22
CLDN6P56747 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC13.68□□□□□ -0.22
CLDN6P56747 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN6P56747 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC13.68□□□□□ -0.22
CLDN6P56747 USB1-205ENST00000561743 1135 ntTSL 3 BASIC13.68□□□□□ -0.22
CLDN6P56747 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
CLDN6P56747 AC006548.2-201ENST00000605217 529 ntBASIC13.68□□□□□ -0.22
CLDN6P56747 MME-218ENST00000625667 363 ntTSL 5 BASIC13.68□□□□□ -0.22
CLDN6P56747 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC13.68□□□□□ -0.22
CLDN6P56747 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.68□□□□□ -0.22
CLDN6P56747 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.68□□□□□ -0.22
CLDN6P56747 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN6P56747 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN6P56747 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.68□□□□□ -0.22
CLDN6P56747 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN6P56747 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
CLDN6P56747 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN6P56747 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
CLDN6P56747 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC13.68□□□□□ -0.22
CLDN6P56747 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.68□□□□□ -0.22
CLDN6P56747 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN6P56747 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN6P56747 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN6P56747 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
CLDN6P56747 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CLDN6P56747 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
CLDN6P56747 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.67□□□□□ -0.22
CLDN6P56747 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN6P56747 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN6P56747 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CLDN6P56747 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN6P56747 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
CLDN6P56747 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CLDN6P56747 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.67□□□□□ -0.22
CLDN6P56747 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
CLDN6P56747 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CLDN6P56747 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN6P56747 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CLDN6P56747 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN6P56747 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CLDN6P56747 RNVU1-8-201ENST00000364272 125 ntBASIC13.67□□□□□ -0.22
CLDN6P56747 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC13.67□□□□□ -0.22
CLDN6P56747 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN6P56747 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN6P56747 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN6P56747 RN7SL375P-201ENST00000492442 298 ntBASIC13.67□□□□□ -0.22
CLDN6P56747 HINT1-205ENST00000508488 703 ntTSL 2 BASIC13.67□□□□□ -0.22
CLDN6P56747 VENTXP3-201ENST00000546480 773 ntBASIC13.67□□□□□ -0.22
CLDN6P56747 KLF17P1-201ENST00000547105 1126 ntBASIC13.67□□□□□ -0.22
CLDN6P56747 KRT8P2-201ENST00000556193 944 ntBASIC13.67□□□□□ -0.22
CLDN6P56747 NT5C-204ENST00000578337 582 ntTSL 2 BASIC13.67□□□□□ -0.22
CLDN6P56747 AP005212.2-201ENST00000584979 510 ntBASIC13.67□□□□□ -0.22
CLDN6P56747 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
CLDN6P56747 AC008972.2-201ENST00000606587 494 ntBASIC13.67□□□□□ -0.22
CLDN6P56747 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC13.67□□□□□ -0.22
CLDN6P56747 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CLDN6P56747 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.67□□□□□ -0.22
CLDN6P56747 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.67□□□□□ -0.22
CLDN6P56747 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms