Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CMC4P56277 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
CMC4P56277 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC10.66□□□□□ -0.7
CMC4P56277 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CMC4P56277 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
CMC4P56277 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CMC4P56277 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CMC4P56277 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC10.66□□□□□ -0.7
CMC4P56277 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CMC4P56277 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
CMC4P56277 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC10.66□□□□□ -0.7
CMC4P56277 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CMC4P56277 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
CMC4P56277 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
CMC4P56277 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.7
CMC4P56277 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CMC4P56277 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CMC4P56277 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CMC4P56277 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
CMC4P56277 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
CMC4P56277 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
CMC4P56277 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CMC4P56277 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CMC4P56277 AC152010.1-201ENST00000415779 2006 ntBASIC10.65□□□□□ -0.7
CMC4P56277 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC10.65□□□□□ -0.7
CMC4P56277 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
CMC4P56277 AC106881.1-201ENST00000605849 3329 ntBASIC10.65□□□□□ -0.7
CMC4P56277 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
CMC4P56277 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CMC4P56277 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CMC4P56277 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CMC4P56277 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CMC4P56277 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CMC4P56277 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.7
CMC4P56277 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC10.65□□□□□ -0.7
CMC4P56277 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CMC4P56277 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CMC4P56277 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CMC4P56277 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CMC4P56277 BAX-205ENST00000391871 687 ntTSL 5 BASIC10.65□□□□□ -0.7
CMC4P56277 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CMC4P56277 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CMC4P56277 MSRA-203ENST00000441698 788 ntTSL 2 BASIC10.65□□□□□ -0.7
CMC4P56277 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CMC4P56277 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC10.65□□□□□ -0.7
CMC4P56277 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC10.65□□□□□ -0.7
CMC4P56277 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CMC4P56277 AC114947.1-202ENST00000514136 344 ntBASIC10.65□□□□□ -0.7
CMC4P56277 ADM-202ENST00000524948 584 ntTSL 2 BASIC10.65□□□□□ -0.7
CMC4P56277 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
CMC4P56277 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
CMC4P56277 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC10.65□□□□□ -0.7
CMC4P56277 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC10.65□□□□□ -0.7
CMC4P56277 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CMC4P56277 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CMC4P56277 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC10.65□□□□□ -0.7
CMC4P56277 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
CMC4P56277 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC10.65□□□□□ -0.7
CMC4P56277 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CMC4P56277 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CMC4P56277 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
CMC4P56277 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
CMC4P56277 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CMC4P56277 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CMC4P56277 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CMC4P56277 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CMC4P56277 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CMC4P56277 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC10.65□□□□□ -0.7
CMC4P56277 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
CMC4P56277 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC10.65□□□□□ -0.7
CMC4P56277 ABCA2-223ENST00000614293 8146 ntTSL 5 BASIC10.65□□□□□ -0.7
CMC4P56277 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
CMC4P56277 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.71
CMC4P56277 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
CMC4P56277 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.71
CMC4P56277 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
CMC4P56277 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC10.65□□□□□ -0.71
CMC4P56277 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC10.64□□□□□ -0.71
CMC4P56277 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CMC4P56277 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CMC4P56277 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC10.64□□□□□ -0.71
CMC4P56277 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC10.64□□□□□ -0.71
CMC4P56277 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
CMC4P56277 FAHD2A-201ENST00000233379 4757 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CMC4P56277 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
CMC4P56277 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC10.64□□□□□ -0.71
CMC4P56277 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CMC4P56277 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC10.64□□□□□ -0.71
CMC4P56277 HSPA8P5-201ENST00000456928 2069 ntBASIC10.64□□□□□ -0.71
CMC4P56277 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC10.64□□□□□ -0.71
CMC4P56277 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CMC4P56277 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC10.64□□□□□ -0.71
CMC4P56277 FAM95B1-212ENST00000592873 4692 ntBASIC10.64□□□□□ -0.71
CMC4P56277 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CMC4P56277 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC10.64□□□□□ -0.71
CMC4P56277 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC10.64□□□□□ -0.71
CMC4P56277 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
CMC4P56277 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CMC4P56277 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
CMC4P56277 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms