Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.22□□□□□ -0.29
THBS1P07996 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.22□□□□□ -0.29
THBS1P07996 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
THBS1P07996 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
THBS1P07996 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
THBS1P07996 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.22□□□□□ -0.29
THBS1P07996 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.22□□□□□ -0.29
THBS1P07996 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.22□□□□□ -0.29
THBS1P07996 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
THBS1P07996 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC13.22□□□□□ -0.29
THBS1P07996 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
THBS1P07996 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
THBS1P07996 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
THBS1P07996 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
THBS1P07996 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
THBS1P07996 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
THBS1P07996 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
THBS1P07996 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
THBS1P07996 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
THBS1P07996 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.21□□□□□ -0.29
THBS1P07996 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
THBS1P07996 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
THBS1P07996 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
THBS1P07996 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
THBS1P07996 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
THBS1P07996 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
THBS1P07996 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
THBS1P07996 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
THBS1P07996 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
THBS1P07996 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
THBS1P07996 AC020907.1-201ENST00000616460 1350 ntBASIC13.21□□□□□ -0.29
THBS1P07996 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
THBS1P07996 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.29
THBS1P07996 AL590824.1-201ENST00000403828 1349 ntBASIC13.21□□□□□ -0.29
THBS1P07996 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.21□□□□□ -0.29
THBS1P07996 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
THBS1P07996 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
THBS1P07996 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
THBS1P07996 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.21□□□□□ -0.29
THBS1P07996 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
THBS1P07996 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.21□□□□□ -0.29
THBS1P07996 FAM21FP-201ENST00000426241 1131 ntBASIC13.21□□□□□ -0.29
THBS1P07996 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
THBS1P07996 GOSR1-204ENST00000451249 1231 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.29
THBS1P07996 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC13.21□□□□□ -0.29
THBS1P07996 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.21□□□□□ -0.29
THBS1P07996 CD74-212ENST00000524315 584 ntTSL 5 BASIC13.21□□□□□ -0.29
THBS1P07996 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
THBS1P07996 MIR4741-201ENST00000579822 90 ntBASIC13.21□□□□□ -0.29
THBS1P07996 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.21□□□□□ -0.29
THBS1P07996 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.21□□□□□ -0.29
THBS1P07996 AC107308.1-201ENST00000615897 301 ntBASIC13.21□□□□□ -0.29
THBS1P07996 TMEM14EP-202ENST00000639378 1296 ntBASIC13.21□□□□□ -0.29
THBS1P07996 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
THBS1P07996 AL133338.1-201ENST00000565695 1517 ntBASIC13.21□□□□□ -0.29
THBS1P07996 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.21□□□□□ -0.29
THBS1P07996 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
THBS1P07996 AL928654.5-201ENST00000624831 2501 ntBASIC13.21□□□□□ -0.29
THBS1P07996 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
THBS1P07996 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.29
THBS1P07996 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.21□□□□□ -0.29
THBS1P07996 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
THBS1P07996 NCLP1-201ENST00000445357 1963 ntBASIC13.21□□□□□ -0.29
THBS1P07996 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
THBS1P07996 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
THBS1P07996 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
THBS1P07996 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.21□□□□□ -0.3
THBS1P07996 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.21□□□□□ -0.3
THBS1P07996 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
THBS1P07996 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.21□□□□□ -0.3
THBS1P07996 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.21□□□□□ -0.3
THBS1P07996 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.21□□□□□ -0.3
THBS1P07996 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.21□□□□□ -0.3
THBS1P07996 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
THBS1P07996 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
THBS1P07996 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
THBS1P07996 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
THBS1P07996 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC13.2□□□□□ -0.3
THBS1P07996 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
THBS1P07996 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
THBS1P07996 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
THBS1P07996 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
THBS1P07996 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
THBS1P07996 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC13.2□□□□□ -0.3
THBS1P07996 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
THBS1P07996 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
THBS1P07996 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
THBS1P07996 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
THBS1P07996 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.2□□□□□ -0.3
THBS1P07996 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
THBS1P07996 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
THBS1P07996 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
THBS1P07996 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
THBS1P07996 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
THBS1P07996 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC13.2□□□□□ -0.3
THBS1P07996 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
THBS1P07996 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
THBS1P07996 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.2□□□□□ -0.3
THBS1P07996 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
THBS1P07996 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms