Protein–RNA interactions for Protein: O15499

GSC2, Homeobox protein goosecoid-2, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSC2O15499 SPDYE12P-201ENST00000618416 771 ntBASIC13.77□□□□□ -0.21
GSC2O15499 AP001059.3-201ENST00000619053 235 ntBASIC13.77□□□□□ -0.21
GSC2O15499 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
GSC2O15499 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
GSC2O15499 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
GSC2O15499 EPS15L1-202ENST00000455140 3266 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
GSC2O15499 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
GSC2O15499 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
GSC2O15499 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
GSC2O15499 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GSC2O15499 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC13.76□□□□□ -0.21
GSC2O15499 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC13.76□□□□□ -0.21
GSC2O15499 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GSC2O15499 HSPA8P9-201ENST00000485881 1943 ntBASIC13.76□□□□□ -0.21
GSC2O15499 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GSC2O15499 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GSC2O15499 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.76□□□□□ -0.21
GSC2O15499 AC061965.1-201ENST00000560524 1465 ntBASIC13.76□□□□□ -0.21
GSC2O15499 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GSC2O15499 MEP1A-201ENST00000230588 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GSC2O15499 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.76□□□□□ -0.21
GSC2O15499 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GSC2O15499 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GSC2O15499 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GSC2O15499 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GSC2O15499 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
GSC2O15499 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.76□□□□□ -0.21
GSC2O15499 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.76□□□□□ -0.21
GSC2O15499 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.76□□□□□ -0.21
GSC2O15499 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
GSC2O15499 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.76□□□□□ -0.21
GSC2O15499 ALG1L5P-201ENST00000482043 771 ntBASIC13.76□□□□□ -0.21
GSC2O15499 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GSC2O15499 ZNF890P-202ENST00000530367 1156 ntBASIC13.76□□□□□ -0.21
GSC2O15499 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.76□□□□□ -0.21
GSC2O15499 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.76□□□□□ -0.21
GSC2O15499 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.76□□□□□ -0.21
GSC2O15499 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.76□□□□□ -0.21
GSC2O15499 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC13.76□□□□□ -0.21
GSC2O15499 AC009093.7-201ENST00000623853 1223 ntBASIC13.76□□□□□ -0.21
GSC2O15499 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
GSC2O15499 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GSC2O15499 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC13.76□□□□□ -0.21
GSC2O15499 LDLRAD4-AS1-201ENST00000588672 2190 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GSC2O15499 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
GSC2O15499 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GSC2O15499 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GSC2O15499 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GSC2O15499 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GSC2O15499 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GSC2O15499 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GSC2O15499 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
GSC2O15499 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GSC2O15499 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GSC2O15499 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GSC2O15499 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GSC2O15499 LRRC59-203ENST00000576448 1531 ntBASIC13.75□□□□□ -0.21
GSC2O15499 KCNH4-202ENST00000607371 3723 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
GSC2O15499 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GSC2O15499 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GSC2O15499 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GSC2O15499 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC13.75□□□□□ -0.21
GSC2O15499 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GSC2O15499 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC13.75□□□□□ -0.21
GSC2O15499 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GSC2O15499 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
GSC2O15499 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.75□□□□□ -0.21
GSC2O15499 PARP10-205ENST00000525773 3404 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
GSC2O15499 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
GSC2O15499 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
GSC2O15499 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GSC2O15499 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GSC2O15499 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GSC2O15499 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GSC2O15499 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GSC2O15499 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
GSC2O15499 AC114501.2-201ENST00000439631 535 ntBASIC13.75□□□□□ -0.21
GSC2O15499 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GSC2O15499 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GSC2O15499 PGAM5P1-201ENST00000518923 814 ntBASIC13.75□□□□□ -0.21
GSC2O15499 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GSC2O15499 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GSC2O15499 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.75□□□□□ -0.21
GSC2O15499 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.75□□□□□ -0.21
GSC2O15499 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.75□□□□□ -0.21
GSC2O15499 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
GSC2O15499 RBM10-202ENST00000345781 3108 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
GSC2O15499 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
GSC2O15499 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GSC2O15499 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GSC2O15499 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
GSC2O15499 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC13.75□□□□□ -0.21
GSC2O15499 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC13.75□□□□□ -0.21
GSC2O15499 TXNDC17-201ENST00000250101 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GSC2O15499 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GSC2O15499 AL031432.4-201ENST00000641729 2190 ntBASIC13.75□□□□□ -0.21
GSC2O15499 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GSC2O15499 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
GSC2O15499 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GSC2O15499 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms