Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN5O00501 MIR645-201ENST00000385283 94 ntBASIC15.03■□□□□ -0
CLDN5O00501 AC103592.1-201ENST00000394513 664 ntBASIC15.03■□□□□ -0
CLDN5O00501 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC15.03■□□□□ -0
CLDN5O00501 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC15.03■□□□□ -0
CLDN5O00501 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC15.03■□□□□ -0
CLDN5O00501 FGFR3P1-201ENST00000449999 601 ntBASIC15.03■□□□□ -0
CLDN5O00501 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC15.03■□□□□ -0
CLDN5O00501 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC15.03■□□□□ -0
CLDN5O00501 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC15.03■□□□□ -0
CLDN5O00501 NEU3-205ENST00000531619 582 ntTSL 5 BASIC15.03■□□□□ -0
CLDN5O00501 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
CLDN5O00501 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC15.03■□□□□ -0
CLDN5O00501 FOS-206ENST00000555347 1280 ntTSL 2 BASIC15.03■□□□□ -0
CLDN5O00501 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC15.03■□□□□ -0
CLDN5O00501 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC15.03■□□□□ -0
CLDN5O00501 HCG18-245ENST00000602550 559 ntTSL 4 BASIC15.03■□□□□ -0
CLDN5O00501 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC15.03■□□□□ -0
CLDN5O00501 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC15.03■□□□□ -0
CLDN5O00501 AC090643.2-201ENST00000623442 2029 ntBASIC15.03■□□□□ -0
CLDN5O00501 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
CLDN5O00501 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC15.03■□□□□ -0
CLDN5O00501 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CLDN5O00501 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN5O00501 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN5O00501 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN5O00501 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN5O00501 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN5O00501 DDC-213ENST00000617822 1809 ntTSL 3 BASIC15.03■□□□□ -0
CLDN5O00501 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN5O00501 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN5O00501 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CLDN5O00501 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLDN5O00501 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.03■□□□□ -0
CLDN5O00501 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC15.03■□□□□ -0
CLDN5O00501 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CLDN5O00501 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLDN5O00501 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC15.02■□□□□ -0
CLDN5O00501 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CLDN5O00501 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN5O00501 HLA-DQB1-202ENST00000399079 1501 ntBASIC15.02■□□□□ -0
CLDN5O00501 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
CLDN5O00501 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLDN5O00501 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.02■□□□□ -0
CLDN5O00501 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN5O00501 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CLDN5O00501 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC15.02■□□□□ -0
CLDN5O00501 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN5O00501 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN5O00501 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC15.02■□□□□ -0
CLDN5O00501 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CLDN5O00501 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC15.02■□□□□ -0
CLDN5O00501 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
CLDN5O00501 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.02■□□□□ -0
CLDN5O00501 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN5O00501 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN5O00501 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN5O00501 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC15.02■□□□□ -0
CLDN5O00501 HMGA1P1-201ENST00000415560 1062 ntBASIC15.02■□□□□ -0
CLDN5O00501 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC15.02■□□□□ -0
CLDN5O00501 FTH1P22-201ENST00000456305 520 ntBASIC15.02■□□□□ -0
CLDN5O00501 KRT18P15-201ENST00000458108 1291 ntBASIC15.02■□□□□ -0
CLDN5O00501 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC15.02■□□□□ -0
CLDN5O00501 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CLDN5O00501 AC019193.1-201ENST00000506678 823 ntBASIC15.02■□□□□ -0
CLDN5O00501 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC15.02■□□□□ -0
CLDN5O00501 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC15.02■□□□□ -0
CLDN5O00501 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CLDN5O00501 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC15.02■□□□□ -0
CLDN5O00501 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC15.02■□□□□ -0
CLDN5O00501 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
CLDN5O00501 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC15.02■□□□□ -0
CLDN5O00501 AC009560.1-201ENST00000620208 434 ntBASIC15.02■□□□□ -0
CLDN5O00501 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CLDN5O00501 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN5O00501 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN5O00501 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN5O00501 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.02□□□□□ -0.01
CLDN5O00501 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
CLDN5O00501 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC15.02□□□□□ -0.01
CLDN5O00501 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN5O00501 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.02□□□□□ -0.01
CLDN5O00501 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN5O00501 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN5O00501 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN5O00501 TCAM1P-207ENST00000485295 1537 ntBASIC15.02□□□□□ -0.01
CLDN5O00501 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN5O00501 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CLDN5O00501 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC15.02□□□□□ -0.01
CLDN5O00501 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CLDN5O00501 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CLDN5O00501 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC15.01□□□□□ -0.01
CLDN5O00501 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CLDN5O00501 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN5O00501 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
CLDN5O00501 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.01□□□□□ -0.01
CLDN5O00501 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN5O00501 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CLDN5O00501 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CLDN5O00501 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms