Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC090386.2-201ENST00000623010 1039 ntBASIC11.54□□□□□ -0.56
SRRM4A7MD48 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SRRM4A7MD48 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SRRM4A7MD48 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC11.54□□□□□ -0.56
SRRM4A7MD48 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
SRRM4A7MD48 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
SRRM4A7MD48 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
SRRM4A7MD48 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
SRRM4A7MD48 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SRRM4A7MD48 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
SRRM4A7MD48 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
SRRM4A7MD48 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SRRM4A7MD48 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC11.54□□□□□ -0.56
SRRM4A7MD48 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
SRRM4A7MD48 NCLP1-201ENST00000445357 1963 ntBASIC11.54□□□□□ -0.56
SRRM4A7MD48 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
SRRM4A7MD48 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SRRM4A7MD48 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
SRRM4A7MD48 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SRRM4A7MD48 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
SRRM4A7MD48 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SRRM4A7MD48 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SRRM4A7MD48 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SRRM4A7MD48 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SRRM4A7MD48 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SRRM4A7MD48 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 GOLGA8IP-202ENST00000611635 2100 ntBASIC11.53□□□□□ -0.56
SRRM4A7MD48 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SRRM4A7MD48 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SRRM4A7MD48 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SRRM4A7MD48 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SRRM4A7MD48 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SRRM4A7MD48 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SRRM4A7MD48 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SRRM4A7MD48 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 YBX1P6-201ENST00000442962 1002 ntBASIC11.53□□□□□ -0.56
SRRM4A7MD48 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SRRM4A7MD48 AC022210.1-201ENST00000449856 793 ntBASIC11.53□□□□□ -0.56
SRRM4A7MD48 KRT18P15-201ENST00000458108 1291 ntBASIC11.53□□□□□ -0.56
SRRM4A7MD48 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 AGER-214ENST00000538695 487 ntTSL 2 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 HILS1-202ENST00000545329 423 ntBASIC11.53□□□□□ -0.56
SRRM4A7MD48 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SRRM4A7MD48 AL512310.5-201ENST00000551999 515 ntBASIC11.53□□□□□ -0.56
SRRM4A7MD48 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 ARL16-210ENST00000574938 751 ntTSL 2 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SRRM4A7MD48 MIR4259-201ENST00000584466 101 ntBASIC11.53□□□□□ -0.56
SRRM4A7MD48 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SRRM4A7MD48 AC133540.1-201ENST00000620845 1019 ntBASIC11.53□□□□□ -0.56
SRRM4A7MD48 AL035252.4-201ENST00000624174 288 ntBASIC11.53□□□□□ -0.56
SRRM4A7MD48 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SRRM4A7MD48 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SRRM4A7MD48 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 HADH-202ENST00000403312 1752 ntTSL 5 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SRRM4A7MD48 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SRRM4A7MD48 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
SRRM4A7MD48 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SRRM4A7MD48 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
SRRM4A7MD48 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SRRM4A7MD48 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SRRM4A7MD48 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SRRM4A7MD48 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SRRM4A7MD48 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
SRRM4A7MD48 AC126335.2-201ENST00000623362 4637 ntBASIC11.53□□□□□ -0.56
SRRM4A7MD48 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
SRRM4A7MD48 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
SRRM4A7MD48 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC11.52□□□□□ -0.56
SRRM4A7MD48 USP39-220ENST00000613444 2161 ntTSL 2 BASIC11.52□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms