Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 COG5-201ENST00000297135 4060 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
RCL1Q9Y2P8 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 AL161932.2-201ENST00000435436 679 ntBASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 FDX1P1-201ENST00000449115 551 ntBASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 AC114812.1-204ENST00000449669 728 ntBASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 RPL13AP25-201ENST00000484130 612 ntBASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 POLD2P1-201ENST00000511220 997 ntBASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 KRT18P58-201ENST00000527480 1120 ntBASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 AC104506.1-201ENST00000609247 429 ntBASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 AC106818.1-201ENST00000623223 3242 ntBASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 PCDHB19P-202ENST00000625133 2914 ntBASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 TNFRSF8-203ENST00000417814 3593 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
RCL1Q9Y2P8 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 ABCD1P2-201ENST00000429313 1601 ntBASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 SYMPK-214ENST00000599814 6537 ntTSL 2 BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
RCL1Q9Y2P8 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms