Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SATB2Q9UPW6 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.15□□□□□ -0.14
SATB2Q9UPW6 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC14.15□□□□□ -0.14
SATB2Q9UPW6 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SATB2Q9UPW6 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC14.15□□□□□ -0.14
SATB2Q9UPW6 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.15□□□□□ -0.14
SATB2Q9UPW6 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SATB2Q9UPW6 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
SATB2Q9UPW6 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SATB2Q9UPW6 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SATB2Q9UPW6 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SATB2Q9UPW6 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SATB2Q9UPW6 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.15□□□□□ -0.14
SATB2Q9UPW6 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
SATB2Q9UPW6 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SATB2Q9UPW6 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
SATB2Q9UPW6 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SATB2Q9UPW6 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SATB2Q9UPW6 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
SATB2Q9UPW6 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SATB2Q9UPW6 USP47-202ENST00000339865 7775 ntTSL 2 BASIC14.15□□□□□ -0.14
SATB2Q9UPW6 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SATB2Q9UPW6 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
SATB2Q9UPW6 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.15□□□□□ -0.15
SATB2Q9UPW6 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
SATB2Q9UPW6 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 OR2K2-202ENST00000374428 1038 ntBASIC14.14□□□□□ -0.15
SATB2Q9UPW6 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 RPSAP31-201ENST00000416648 895 ntBASIC14.14□□□□□ -0.15
SATB2Q9UPW6 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 AC103810.10-201ENST00000606504 343 ntBASIC14.14□□□□□ -0.15
SATB2Q9UPW6 MIR6720-201ENST00000611664 98 ntBASIC14.14□□□□□ -0.15
SATB2Q9UPW6 Z98259.2-201ENST00000641583 609 ntBASIC14.14□□□□□ -0.15
SATB2Q9UPW6 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 COL6A4P2-202ENST00000504443 2753 ntBASIC14.14□□□□□ -0.15
SATB2Q9UPW6 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 AL138725.1-201ENST00000407347 1314 ntBASIC14.14□□□□□ -0.15
SATB2Q9UPW6 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SATB2Q9UPW6 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.13□□□□□ -0.15
SATB2Q9UPW6 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.13□□□□□ -0.15
SATB2Q9UPW6 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.13□□□□□ -0.15
SATB2Q9UPW6 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC14.13□□□□□ -0.15
SATB2Q9UPW6 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SATB2Q9UPW6 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SATB2Q9UPW6 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SATB2Q9UPW6 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
SATB2Q9UPW6 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SATB2Q9UPW6 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SATB2Q9UPW6 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SATB2Q9UPW6 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SATB2Q9UPW6 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SATB2Q9UPW6 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SATB2Q9UPW6 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SATB2Q9UPW6 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms