Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CBX8Q9HC52 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CBX8Q9HC52 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CBX8Q9HC52 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CBX8Q9HC52 Z98257.2-202ENST00000641138 1548 ntBASIC16.01■□□□□ 0.15
CBX8Q9HC52 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CBX8Q9HC52 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC16.01■□□□□ 0.15
CBX8Q9HC52 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CBX8Q9HC52 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CBX8Q9HC52 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CBX8Q9HC52 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CBX8Q9HC52 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CBX8Q9HC52 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.01■□□□□ 0.15
CBX8Q9HC52 BASP1P1-201ENST00000430708 665 ntBASIC16.01■□□□□ 0.15
CBX8Q9HC52 DFFBP1-201ENST00000433250 979 ntBASIC16.01■□□□□ 0.15
CBX8Q9HC52 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.01■□□□□ 0.15
CBX8Q9HC52 SPTLC1P1-201ENST00000447199 261 ntBASIC16.01■□□□□ 0.15
CBX8Q9HC52 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CBX8Q9HC52 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC16.01■□□□□ 0.15
CBX8Q9HC52 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CBX8Q9HC52 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CBX8Q9HC52 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC16.01■□□□□ 0.15
CBX8Q9HC52 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.01■□□□□ 0.15
CBX8Q9HC52 AC009486.1-201ENST00000569860 813 ntBASIC16.01■□□□□ 0.15
CBX8Q9HC52 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.01■□□□□ 0.15
CBX8Q9HC52 AC027601.3-201ENST00000622907 509 ntBASIC16.01■□□□□ 0.15
CBX8Q9HC52 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC16.01■□□□□ 0.15
CBX8Q9HC52 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CBX8Q9HC52 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC16.01■□□□□ 0.15
CBX8Q9HC52 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CBX8Q9HC52 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CBX8Q9HC52 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CBX8Q9HC52 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
CBX8Q9HC52 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CBX8Q9HC52 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
CBX8Q9HC52 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CBX8Q9HC52 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CBX8Q9HC52 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CBX8Q9HC52 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC16.01■□□□□ 0.15
CBX8Q9HC52 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC16.01■□□□□ 0.15
CBX8Q9HC52 VENTXP1-201ENST00000569334 2716 ntBASIC16.01■□□□□ 0.15
CBX8Q9HC52 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CBX8Q9HC52 LINC01165-201ENST00000445190 1623 ntBASIC16.01■□□□□ 0.15
CBX8Q9HC52 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CBX8Q9HC52 TP73-211ENST00000604074 4806 ntTSL 5 BASIC16.01■□□□□ 0.15
CBX8Q9HC52 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CBX8Q9HC52 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CBX8Q9HC52 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CBX8Q9HC52 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CBX8Q9HC52 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16■□□□□ 0.15
CBX8Q9HC52 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CBX8Q9HC52 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC16■□□□□ 0.15
CBX8Q9HC52 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC16■□□□□ 0.15
CBX8Q9HC52 EML1-203ENST00000334192 4064 ntTSL 5 BASIC16■□□□□ 0.15
CBX8Q9HC52 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CBX8Q9HC52 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CBX8Q9HC52 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16■□□□□ 0.15
CBX8Q9HC52 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC16■□□□□ 0.15
CBX8Q9HC52 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CBX8Q9HC52 GHET1-201ENST00000627071 1906 ntBASIC16■□□□□ 0.15
CBX8Q9HC52 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CBX8Q9HC52 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CBX8Q9HC52 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC16■□□□□ 0.15
CBX8Q9HC52 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CBX8Q9HC52 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC16■□□□□ 0.15
CBX8Q9HC52 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CBX8Q9HC52 NSL1-201ENST00000366976 722 ntTSL 2 BASIC16■□□□□ 0.15
CBX8Q9HC52 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16■□□□□ 0.15
CBX8Q9HC52 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
CBX8Q9HC52 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CBX8Q9HC52 AL162726.2-201ENST00000438986 1017 ntBASIC16■□□□□ 0.15
CBX8Q9HC52 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16■□□□□ 0.15
CBX8Q9HC52 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16■□□□□ 0.15
CBX8Q9HC52 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16■□□□□ 0.15
CBX8Q9HC52 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16■□□□□ 0.15
CBX8Q9HC52 CTBP2P3-201ENST00000585629 1255 ntBASIC16■□□□□ 0.15
CBX8Q9HC52 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
CBX8Q9HC52 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC16■□□□□ 0.15
CBX8Q9HC52 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CBX8Q9HC52 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC16■□□□□ 0.15
CBX8Q9HC52 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC16■□□□□ 0.15
CBX8Q9HC52 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CBX8Q9HC52 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
CBX8Q9HC52 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CBX8Q9HC52 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16■□□□□ 0.15
CBX8Q9HC52 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC16■□□□□ 0.15
CBX8Q9HC52 USP39-220ENST00000613444 2161 ntTSL 2 BASIC16■□□□□ 0.15
CBX8Q9HC52 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CBX8Q9HC52 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC16■□□□□ 0.15
CBX8Q9HC52 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC16■□□□□ 0.15
CBX8Q9HC52 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16■□□□□ 0.15
CBX8Q9HC52 SHC1-202ENST00000368445 3472 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
CBX8Q9HC52 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC16■□□□□ 0.15
CBX8Q9HC52 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
CBX8Q9HC52 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CBX8Q9HC52 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC15.99■□□□□ 0.15
CBX8Q9HC52 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC15.99■□□□□ 0.15
CBX8Q9HC52 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CBX8Q9HC52 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
CBX8Q9HC52 AL031595.1-201ENST00000623969 4709 ntBASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms