Protein–RNA interactions for Protein: Q99674

CGREF1, Cell growth regulator with EF hand domain protein 1, humanhuman

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1Q99674 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
CGREF1Q99674 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.68□□□□□ -0.22
CGREF1Q99674 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC13.68□□□□□ -0.22
CGREF1Q99674 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
CGREF1Q99674 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
CGREF1Q99674 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.67□□□□□ -0.22
CGREF1Q99674 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC13.67□□□□□ -0.22
CGREF1Q99674 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CGREF1Q99674 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CGREF1Q99674 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
CGREF1Q99674 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CGREF1Q99674 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CGREF1Q99674 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CGREF1Q99674 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CGREF1Q99674 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.67□□□□□ -0.22
CGREF1Q99674 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CGREF1Q99674 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
CGREF1Q99674 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CGREF1Q99674 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
CGREF1Q99674 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CGREF1Q99674 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CGREF1Q99674 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.67□□□□□ -0.22
CGREF1Q99674 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.67□□□□□ -0.22
CGREF1Q99674 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CGREF1Q99674 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.67□□□□□ -0.22
CGREF1Q99674 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.67□□□□□ -0.22
CGREF1Q99674 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.67□□□□□ -0.22
CGREF1Q99674 AC027601.3-201ENST00000622907 509 ntBASIC13.67□□□□□ -0.22
CGREF1Q99674 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CGREF1Q99674 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.67□□□□□ -0.22
CGREF1Q99674 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.67□□□□□ -0.22
CGREF1Q99674 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CGREF1Q99674 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
CGREF1Q99674 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CGREF1Q99674 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
CGREF1Q99674 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
CGREF1Q99674 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CGREF1Q99674 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC13.67□□□□□ -0.22
CGREF1Q99674 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC13.67□□□□□ -0.22
CGREF1Q99674 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CGREF1Q99674 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13.67□□□□□ -0.22
CGREF1Q99674 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CGREF1Q99674 FAM155B-201ENST00000252338 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CGREF1Q99674 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CGREF1Q99674 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CGREF1Q99674 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC13.67□□□□□ -0.22
CGREF1Q99674 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
CGREF1Q99674 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
CGREF1Q99674 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CGREF1Q99674 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
CGREF1Q99674 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CGREF1Q99674 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC13.66□□□□□ -0.22
CGREF1Q99674 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CGREF1Q99674 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CGREF1Q99674 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CGREF1Q99674 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CGREF1Q99674 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CGREF1Q99674 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CGREF1Q99674 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CGREF1Q99674 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CGREF1Q99674 AL359845.1-201ENST00000458202 1648 ntBASIC13.66□□□□□ -0.22
CGREF1Q99674 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.66□□□□□ -0.22
CGREF1Q99674 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CGREF1Q99674 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CGREF1Q99674 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.66□□□□□ -0.22
CGREF1Q99674 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
CGREF1Q99674 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
CGREF1Q99674 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.66□□□□□ -0.22
CGREF1Q99674 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.66□□□□□ -0.22
CGREF1Q99674 AP003171.2-201ENST00000528208 925 ntBASIC13.66□□□□□ -0.22
CGREF1Q99674 PTP4A1P2-201ENST00000546033 454 ntBASIC13.66□□□□□ -0.22
CGREF1Q99674 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.66□□□□□ -0.22
CGREF1Q99674 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CGREF1Q99674 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.66□□□□□ -0.22
CGREF1Q99674 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC13.66□□□□□ -0.22
CGREF1Q99674 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.66□□□□□ -0.22
CGREF1Q99674 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.66□□□□□ -0.22
CGREF1Q99674 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.66□□□□□ -0.22
CGREF1Q99674 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.66□□□□□ -0.22
CGREF1Q99674 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.66□□□□□ -0.22
CGREF1Q99674 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.66□□□□□ -0.22
CGREF1Q99674 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.66□□□□□ -0.22
CGREF1Q99674 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.66□□□□□ -0.22
CGREF1Q99674 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
CGREF1Q99674 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.66□□□□□ -0.22
CGREF1Q99674 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CGREF1Q99674 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CGREF1Q99674 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
CGREF1Q99674 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CGREF1Q99674 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC13.66□□□□□ -0.22
CGREF1Q99674 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CGREF1Q99674 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.66□□□□□ -0.22
CGREF1Q99674 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
CGREF1Q99674 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CGREF1Q99674 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.66□□□□□ -0.22
CGREF1Q99674 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CGREF1Q99674 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CGREF1Q99674 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CGREF1Q99674 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CGREF1Q99674 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms