Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC13.88□□□□□ -0.19
LYSMD4Q5XG99 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD4Q5XG99 CTBP1-AS2-206ENST00000581398 5652 ntBASIC13.88□□□□□ -0.19
LYSMD4Q5XG99 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD4Q5XG99 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD4Q5XG99 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
LYSMD4Q5XG99 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
LYSMD4Q5XG99 AC117503.4-201ENST00000623229 1418 ntBASIC13.88□□□□□ -0.19
LYSMD4Q5XG99 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.88□□□□□ -0.19
LYSMD4Q5XG99 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.88□□□□□ -0.19
LYSMD4Q5XG99 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
LYSMD4Q5XG99 AL590824.1-201ENST00000403828 1349 ntBASIC13.88□□□□□ -0.19
LYSMD4Q5XG99 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC13.88□□□□□ -0.19
LYSMD4Q5XG99 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD4Q5XG99 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
LYSMD4Q5XG99 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.88□□□□□ -0.19
LYSMD4Q5XG99 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 NRADDP-201ENST00000437305 691 ntBASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 AC092903.1-201ENST00000466506 262 ntBASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 RN7SL351P-201ENST00000469306 248 ntBASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 COQ10BP2-201ENST00000513804 724 ntBASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 AC022447.6-201ENST00000515522 438 ntBASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 SCGB1B2P-201ENST00000595013 612 ntTSL 2 BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 AL031673.1-201ENST00000611460 466 ntBASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 CCL3L3-203ENST00000619989 784 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 CD79B-201ENST00000006750 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
LYSMD4Q5XG99 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 AC006486.2-201ENST00000624246 2199 ntBASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 ACTBP14-201ENST00000411655 1089 ntBASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 LRRC75A-AS1-214ENST00000487066 763 ntTSL 3 BASIC13.86□□□□□ -0.19
LYSMD4Q5XG99 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms