Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 LINC02433-202ENST00000507108 1395 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 RER1-203ENST00000378513 3000 ntTSL 3 BASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 ARAF-202ENST00000377039 1271 ntTSL 2 BASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 TRAPPC2L-212ENST00000567312 499 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 AC008622.3-201ENST00000621170 600 ntBASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDC42BPAQ5VT25 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDC42BPAQ5VT25 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC20.8■□□□□ 0.92
CDC42BPAQ5VT25 GPN3-203ENST00000543199 1604 ntTSL 5 BASIC20.8■□□□□ 0.92
CDC42BPAQ5VT25 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CDC42BPAQ5VT25 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDC42BPAQ5VT25 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC20.8■□□□□ 0.92
CDC42BPAQ5VT25 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDC42BPAQ5VT25 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDC42BPAQ5VT25 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
CDC42BPAQ5VT25 CROT-203ENST00000419147 2959 ntTSL 2 BASIC20.8■□□□□ 0.92
CDC42BPAQ5VT25 AK2-208ENST00000487289 920 ntTSL 2 BASIC20.8■□□□□ 0.92
CDC42BPAQ5VT25 MARK2P17-201ENST00000498560 841 ntBASIC20.8■□□□□ 0.92
CDC42BPAQ5VT25 RN7SL121P-201ENST00000584223 273 ntBASIC20.8■□□□□ 0.92
CDC42BPAQ5VT25 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC20.8■□□□□ 0.92
CDC42BPAQ5VT25 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDC42BPAQ5VT25 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CDC42BPAQ5VT25 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDC42BPAQ5VT25 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDC42BPAQ5VT25 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDC42BPAQ5VT25 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDC42BPAQ5VT25 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC20.8■□□□□ 0.92
CDC42BPAQ5VT25 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDC42BPAQ5VT25 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDC42BPAQ5VT25 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDC42BPAQ5VT25 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CDC42BPAQ5VT25 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDC42BPAQ5VT25 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDC42BPAQ5VT25 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDC42BPAQ5VT25 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC20.79■□□□□ 0.92
CDC42BPAQ5VT25 AC012358.2-201ENST00000430010 1434 ntBASIC20.79■□□□□ 0.92
CDC42BPAQ5VT25 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDC42BPAQ5VT25 DNM1P46-202ENST00000415963 882 ntBASIC20.79■□□□□ 0.92
CDC42BPAQ5VT25 AC000077.1-201ENST00000420012 953 ntBASIC20.79■□□□□ 0.92
CDC42BPAQ5VT25 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDC42BPAQ5VT25 SAA2-206ENST00000530400 323 ntTSL 3 BASIC20.79■□□□□ 0.92
CDC42BPAQ5VT25 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC20.79■□□□□ 0.92
CDC42BPAQ5VT25 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC20.79■□□□□ 0.92
CDC42BPAQ5VT25 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDC42BPAQ5VT25 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
CDC42BPAQ5VT25 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC20.79■□□□□ 0.92
CDC42BPAQ5VT25 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDC42BPAQ5VT25 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDC42BPAQ5VT25 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC20.79■□□□□ 0.92
CDC42BPAQ5VT25 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CDC42BPAQ5VT25 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC20.79■□□□□ 0.92
CDC42BPAQ5VT25 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDC42BPAQ5VT25 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDC42BPAQ5VT25 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDC42BPAQ5VT25 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC20.79■□□□□ 0.92
CDC42BPAQ5VT25 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.79■□□□□ 0.92
CDC42BPAQ5VT25 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDC42BPAQ5VT25 ERG-211ENST00000453032 1595 ntTSL 2 BASIC20.79■□□□□ 0.92
CDC42BPAQ5VT25 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC20.79■□□□□ 0.92
CDC42BPAQ5VT25 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CDC42BPAQ5VT25 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDC42BPAQ5VT25 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC20.78■□□□□ 0.92
CDC42BPAQ5VT25 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDC42BPAQ5VT25 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CDC42BPAQ5VT25 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDC42BPAQ5VT25 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDC42BPAQ5VT25 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
CDC42BPAQ5VT25 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDC42BPAQ5VT25 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDC42BPAQ5VT25 KRT8P38-201ENST00000441370 1430 ntBASIC20.78■□□□□ 0.92
CDC42BPAQ5VT25 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDC42BPAQ5VT25 AP000437.1-201ENST00000624057 2085 ntBASIC20.78■□□□□ 0.92
CDC42BPAQ5VT25 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDC42BPAQ5VT25 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDC42BPAQ5VT25 CELA3A-201ENST00000290122 887 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDC42BPAQ5VT25 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
CDC42BPAQ5VT25 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC20.78■□□□□ 0.92
CDC42BPAQ5VT25 KRT18P44-201ENST00000416086 1285 ntBASIC20.78■□□□□ 0.92
CDC42BPAQ5VT25 KRT19P4-201ENST00000443208 943 ntBASIC20.78■□□□□ 0.92
CDC42BPAQ5VT25 CYB5D2-202ENST00000573984 495 ntTSL 4 BASIC20.78■□□□□ 0.92
CDC42BPAQ5VT25 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC20.78■□□□□ 0.92
CDC42BPAQ5VT25 AC020922.4-201ENST00000621389 339 ntBASIC20.78■□□□□ 0.92
CDC42BPAQ5VT25 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDC42BPAQ5VT25 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDC42BPAQ5VT25 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CDC42BPAQ5VT25 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC20.78■□□□□ 0.92
CDC42BPAQ5VT25 LINC01658-201ENST00000320372 1578 ntTSL 2 BASIC20.77■□□□□ 0.92
CDC42BPAQ5VT25 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDC42BPAQ5VT25 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CDC42BPAQ5VT25 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
CDC42BPAQ5VT25 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CDC42BPAQ5VT25 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms