Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CXCR4P61073 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CXCR4P61073 GRIN1-202ENST00000371546 4114 ntTSL 5 BASIC13.09□□□□□ -0.31
CXCR4P61073 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC13.09□□□□□ -0.31
CXCR4P61073 SLC7A15P-201ENST00000424028 1363 ntBASIC13.09□□□□□ -0.31
CXCR4P61073 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CXCR4P61073 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CXCR4P61073 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CXCR4P61073 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC13.09□□□□□ -0.31
CXCR4P61073 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CXCR4P61073 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CXCR4P61073 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CXCR4P61073 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CXCR4P61073 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CXCR4P61073 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC13.09□□□□□ -0.31
CXCR4P61073 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CXCR4P61073 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
CXCR4P61073 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CXCR4P61073 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CXCR4P61073 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.09□□□□□ -0.31
CXCR4P61073 BASP1P1-201ENST00000430708 665 ntBASIC13.09□□□□□ -0.31
CXCR4P61073 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.09□□□□□ -0.31
CXCR4P61073 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CXCR4P61073 PUDPP3-201ENST00000445368 636 ntBASIC13.09□□□□□ -0.31
CXCR4P61073 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CXCR4P61073 TMPRSS11CP-201ENST00000453277 683 ntBASIC13.09□□□□□ -0.31
CXCR4P61073 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.09□□□□□ -0.31
CXCR4P61073 FO681548.1-201ENST00000455617 1132 ntBASIC13.09□□□□□ -0.31
CXCR4P61073 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.09□□□□□ -0.31
CXCR4P61073 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.09□□□□□ -0.31
CXCR4P61073 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.09□□□□□ -0.31
CXCR4P61073 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.09□□□□□ -0.31
CXCR4P61073 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.09□□□□□ -0.31
CXCR4P61073 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.09□□□□□ -0.31
CXCR4P61073 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CXCR4P61073 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC13.09□□□□□ -0.31
CXCR4P61073 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.09□□□□□ -0.31
CXCR4P61073 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.09□□□□□ -0.31
CXCR4P61073 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.09□□□□□ -0.31
CXCR4P61073 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CXCR4P61073 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC13.09□□□□□ -0.31
CXCR4P61073 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.09□□□□□ -0.31
CXCR4P61073 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CXCR4P61073 AC093726.1-201ENST00000608064 963 ntBASIC13.09□□□□□ -0.31
CXCR4P61073 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.09□□□□□ -0.31
CXCR4P61073 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CXCR4P61073 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.09□□□□□ -0.31
CXCR4P61073 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CXCR4P61073 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CXCR4P61073 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CXCR4P61073 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CXCR4P61073 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CXCR4P61073 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC13.09□□□□□ -0.31
CXCR4P61073 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CXCR4P61073 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CXCR4P61073 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CXCR4P61073 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CXCR4P61073 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CXCR4P61073 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CXCR4P61073 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CXCR4P61073 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CXCR4P61073 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CXCR4P61073 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC13.08□□□□□ -0.31
CXCR4P61073 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.08□□□□□ -0.31
CXCR4P61073 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
CXCR4P61073 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
CXCR4P61073 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CXCR4P61073 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC13.08□□□□□ -0.32
CXCR4P61073 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC13.08□□□□□ -0.32
CXCR4P61073 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.08□□□□□ -0.32
CXCR4P61073 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CXCR4P61073 AC009093.10-201ENST00000641956 1442 ntBASIC13.08□□□□□ -0.32
CXCR4P61073 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CXCR4P61073 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
CXCR4P61073 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.08□□□□□ -0.32
CXCR4P61073 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CXCR4P61073 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CXCR4P61073 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CXCR4P61073 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.08□□□□□ -0.32
CXCR4P61073 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CXCR4P61073 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CXCR4P61073 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CXCR4P61073 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.08□□□□□ -0.32
CXCR4P61073 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.08□□□□□ -0.32
CXCR4P61073 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.08□□□□□ -0.32
CXCR4P61073 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.08□□□□□ -0.32
CXCR4P61073 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CXCR4P61073 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CXCR4P61073 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CXCR4P61073 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CXCR4P61073 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CXCR4P61073 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CXCR4P61073 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CXCR4P61073 AC025183.3-201ENST00000623526 1482 ntBASIC13.08□□□□□ -0.32
CXCR4P61073 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CXCR4P61073 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CXCR4P61073 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CXCR4P61073 PID1-202ENST00000392054 2745 ntTSL 2 BASIC13.08□□□□□ -0.32
CXCR4P61073 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CXCR4P61073 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms