Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.35□□□□□ -0.43
AP3S2P59780 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
AP3S2P59780 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC12.35□□□□□ -0.43
AP3S2P59780 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC12.35□□□□□ -0.43
AP3S2P59780 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S2P59780 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC12.35□□□□□ -0.43
AP3S2P59780 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S2P59780 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
AP3S2P59780 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.35□□□□□ -0.43
AP3S2P59780 AC004623.1-201ENST00000624592 2127 ntBASIC12.35□□□□□ -0.43
AP3S2P59780 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.35□□□□□ -0.43
AP3S2P59780 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S2P59780 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.35□□□□□ -0.43
AP3S2P59780 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S2P59780 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S2P59780 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S2P59780 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
AP3S2P59780 PCNX4-202ENST00000391611 4073 ntTSL 2 BASIC12.35□□□□□ -0.43
AP3S2P59780 SPTB-203ENST00000389721 6705 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S2P59780 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC12.35□□□□□ -0.43
AP3S2P59780 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S2P59780 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC12.35□□□□□ -0.43
AP3S2P59780 AL138725.1-201ENST00000407347 1314 ntBASIC12.35□□□□□ -0.43
AP3S2P59780 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
AP3S2P59780 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
AP3S2P59780 DLGAP1-212ENST00000515196 5314 ntTSL 2 BASIC12.35□□□□□ -0.43
AP3S2P59780 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
AP3S2P59780 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.34□□□□□ -0.43
AP3S2P59780 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC12.34□□□□□ -0.43
AP3S2P59780 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
AP3S2P59780 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.34□□□□□ -0.43
AP3S2P59780 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S2P59780 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC12.34□□□□□ -0.43
AP3S2P59780 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S2P59780 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S2P59780 ZNF259P1-201ENST00000407656 1365 ntBASIC12.34□□□□□ -0.43
AP3S2P59780 CACNA1G-219ENST00000507609 6849 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S2P59780 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S2P59780 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S2P59780 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S2P59780 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC12.34□□□□□ -0.43
AP3S2P59780 PCDHB19P-202ENST00000625133 2914 ntBASIC12.34□□□□□ -0.43
AP3S2P59780 ESR2-213ENST00000557772 5458 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S2P59780 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S2P59780 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S2P59780 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S2P59780 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S2P59780 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S2P59780 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S2P59780 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
AP3S2P59780 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.34□□□□□ -0.43
AP3S2P59780 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S2P59780 SPDYE7P-202ENST00000420373 878 ntBASIC12.34□□□□□ -0.43
AP3S2P59780 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC12.34□□□□□ -0.43
AP3S2P59780 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC12.34□□□□□ -0.43
AP3S2P59780 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.34□□□□□ -0.43
AP3S2P59780 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S2P59780 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S2P59780 GIMAP3P-201ENST00000495150 836 ntBASIC12.34□□□□□ -0.43
AP3S2P59780 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.34□□□□□ -0.43
AP3S2P59780 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.34□□□□□ -0.43
AP3S2P59780 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.34□□□□□ -0.43
AP3S2P59780 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.34□□□□□ -0.43
AP3S2P59780 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.34□□□□□ -0.43
AP3S2P59780 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.34□□□□□ -0.43
AP3S2P59780 AC051619.7-201ENST00000568314 623 ntBASIC12.34□□□□□ -0.43
AP3S2P59780 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S2P59780 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S2P59780 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S2P59780 MIR4453-201ENST00000584019 89 ntBASIC12.34□□□□□ -0.43
AP3S2P59780 MIR6080-201ENST00000617359 66 ntBASIC12.34□□□□□ -0.43
AP3S2P59780 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S2P59780 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
AP3S2P59780 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S2P59780 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S2P59780 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S2P59780 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S2P59780 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC12.34□□□□□ -0.43
AP3S2P59780 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S2P59780 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S2P59780 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S2P59780 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S2P59780 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S2P59780 MYRIP-201ENST00000302541 5077 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S2P59780 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S2P59780 AC002350.2-201ENST00000623894 1828 ntBASIC12.34□□□□□ -0.43
AP3S2P59780 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S2P59780 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC12.34□□□□□ -0.43
AP3S2P59780 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
AP3S2P59780 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC12.34□□□□□ -0.43
AP3S2P59780 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.34□□□□□ -0.43
AP3S2P59780 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.34□□□□□ -0.43
AP3S2P59780 C2-209ENST00000452323 1999 ntTSL 2 BASIC12.34□□□□□ -0.43
AP3S2P59780 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S2P59780 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.34□□□□□ -0.43
AP3S2P59780 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC12.34□□□□□ -0.43
AP3S2P59780 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S2P59780 ERCC5-201ENST00000355739 5082 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
AP3S2P59780 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
AP3S2P59780 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms