Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SRP9P49458 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.81□□□□□ -0.36
SRP9P49458 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
SRP9P49458 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.81□□□□□ -0.36
SRP9P49458 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SRP9P49458 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SRP9P49458 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SRP9P49458 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
SRP9P49458 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SRP9P49458 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SRP9P49458 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.81□□□□□ -0.36
SRP9P49458 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SRP9P49458 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SRP9P49458 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SRP9P49458 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.8□□□□□ -0.36
SRP9P49458 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.8□□□□□ -0.36
SRP9P49458 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SRP9P49458 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SRP9P49458 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
SRP9P49458 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SRP9P49458 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.8□□□□□ -0.36
SRP9P49458 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SRP9P49458 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SRP9P49458 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.8□□□□□ -0.36
SRP9P49458 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.8□□□□□ -0.36
SRP9P49458 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SRP9P49458 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SRP9P49458 STK3-218ENST00000617590 2485 ntTSL 5 BASIC12.8□□□□□ -0.36
SRP9P49458 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SRP9P49458 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC12.8□□□□□ -0.36
SRP9P49458 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SRP9P49458 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.8□□□□□ -0.36
SRP9P49458 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SRP9P49458 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SRP9P49458 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SRP9P49458 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
SRP9P49458 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SRP9P49458 AC026434.2-201ENST00000506094 1078 ntBASIC12.8□□□□□ -0.36
SRP9P49458 RNA5SP486-201ENST00000515961 83 ntBASIC12.8□□□□□ -0.36
SRP9P49458 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.8□□□□□ -0.36
SRP9P49458 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SRP9P49458 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.8□□□□□ -0.36
SRP9P49458 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.8□□□□□ -0.36
SRP9P49458 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SRP9P49458 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC12.8□□□□□ -0.36
SRP9P49458 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
SRP9P49458 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SRP9P49458 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SRP9P49458 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.8□□□□□ -0.36
SRP9P49458 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SRP9P49458 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SRP9P49458 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SRP9P49458 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC12.8□□□□□ -0.36
SRP9P49458 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC12.8□□□□□ -0.36
SRP9P49458 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SRP9P49458 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SRP9P49458 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SRP9P49458 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SRP9P49458 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SRP9P49458 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SRP9P49458 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC12.79□□□□□ -0.36
SRP9P49458 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
SRP9P49458 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SRP9P49458 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
SRP9P49458 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC12.79□□□□□ -0.36
SRP9P49458 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SRP9P49458 AC011498.7-201ENST00000624986 2027 ntBASIC12.79□□□□□ -0.36
SRP9P49458 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.79□□□□□ -0.36
SRP9P49458 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SRP9P49458 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SRP9P49458 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SRP9P49458 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SRP9P49458 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SRP9P49458 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SRP9P49458 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SRP9P49458 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SRP9P49458 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SRP9P49458 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SRP9P49458 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.79□□□□□ -0.36
SRP9P49458 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SRP9P49458 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SRP9P49458 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SRP9P49458 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.79□□□□□ -0.36
SRP9P49458 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SRP9P49458 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SRP9P49458 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.79□□□□□ -0.36
SRP9P49458 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SRP9P49458 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SRP9P49458 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SRP9P49458 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.79□□□□□ -0.36
SRP9P49458 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.79□□□□□ -0.36
SRP9P49458 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
SRP9P49458 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
SRP9P49458 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SRP9P49458 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SRP9P49458 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.79□□□□□ -0.36
SRP9P49458 KLF2P4-201ENST00000451959 1225 ntBASIC12.79□□□□□ -0.36
SRP9P49458 FO681548.1-201ENST00000455617 1132 ntBASIC12.79□□□□□ -0.36
SRP9P49458 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC12.79□□□□□ -0.36
SRP9P49458 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms