Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
RAB40ALP0C0E4 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
RAB40ALP0C0E4 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAB40ALP0C0E4 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAB40ALP0C0E4 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
RAB40ALP0C0E4 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAB40ALP0C0E4 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAB40ALP0C0E4 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAB40ALP0C0E4 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.52□□□□□ -0.24
RAB40ALP0C0E4 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RAB40ALP0C0E4 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
RAB40ALP0C0E4 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
RAB40ALP0C0E4 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RAB40ALP0C0E4 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.52□□□□□ -0.25
RAB40ALP0C0E4 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB40ALP0C0E4 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB40ALP0C0E4 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
RAB40ALP0C0E4 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB40ALP0C0E4 SOD2-202ENST00000367054 815 ntTSL 2 BASIC13.52□□□□□ -0.25
RAB40ALP0C0E4 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
RAB40ALP0C0E4 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC13.52□□□□□ -0.25
RAB40ALP0C0E4 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC13.52□□□□□ -0.25
RAB40ALP0C0E4 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC13.52□□□□□ -0.25
RAB40ALP0C0E4 RN7SL8P-201ENST00000461771 266 ntBASIC13.52□□□□□ -0.25
RAB40ALP0C0E4 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC13.52□□□□□ -0.25
RAB40ALP0C0E4 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC13.52□□□□□ -0.25
RAB40ALP0C0E4 MIR4522-201ENST00000584932 87 ntBASIC13.52□□□□□ -0.25
RAB40ALP0C0E4 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC13.52□□□□□ -0.25
RAB40ALP0C0E4 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC13.52□□□□□ -0.25
RAB40ALP0C0E4 RN7SL736P-201ENST00000613111 269 ntBASIC13.52□□□□□ -0.25
RAB40ALP0C0E4 AP003419.4-201ENST00000616071 517 ntBASIC13.52□□□□□ -0.25
RAB40ALP0C0E4 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB40ALP0C0E4 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.52□□□□□ -0.25
RAB40ALP0C0E4 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
RAB40ALP0C0E4 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB40ALP0C0E4 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.52□□□□□ -0.25
RAB40ALP0C0E4 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.52□□□□□ -0.25
RAB40ALP0C0E4 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.52□□□□□ -0.25
RAB40ALP0C0E4 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.52□□□□□ -0.25
RAB40ALP0C0E4 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.52□□□□□ -0.25
RAB40ALP0C0E4 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB40ALP0C0E4 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
RAB40ALP0C0E4 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.52□□□□□ -0.25
RAB40ALP0C0E4 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.52□□□□□ -0.25
RAB40ALP0C0E4 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.25
RAB40ALP0C0E4 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
RAB40ALP0C0E4 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40ALP0C0E4 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40ALP0C0E4 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40ALP0C0E4 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40ALP0C0E4 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.51□□□□□ -0.25
RAB40ALP0C0E4 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40ALP0C0E4 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC13.51□□□□□ -0.25
RAB40ALP0C0E4 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
RAB40ALP0C0E4 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40ALP0C0E4 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC13.51□□□□□ -0.25
RAB40ALP0C0E4 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC13.51□□□□□ -0.25
RAB40ALP0C0E4 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40ALP0C0E4 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC13.51□□□□□ -0.25
RAB40ALP0C0E4 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40ALP0C0E4 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40ALP0C0E4 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC13.51□□□□□ -0.25
RAB40ALP0C0E4 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC13.51□□□□□ -0.25
RAB40ALP0C0E4 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40ALP0C0E4 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40ALP0C0E4 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
RAB40ALP0C0E4 RN7SL277P-201ENST00000481521 288 ntBASIC13.51□□□□□ -0.25
RAB40ALP0C0E4 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC13.51□□□□□ -0.25
RAB40ALP0C0E4 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC13.51□□□□□ -0.25
RAB40ALP0C0E4 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC13.51□□□□□ -0.25
RAB40ALP0C0E4 MIR6074-201ENST00000612054 107 ntBASIC13.51□□□□□ -0.25
RAB40ALP0C0E4 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
RAB40ALP0C0E4 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40ALP0C0E4 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40ALP0C0E4 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40ALP0C0E4 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40ALP0C0E4 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC13.51□□□□□ -0.25
RAB40ALP0C0E4 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40ALP0C0E4 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40ALP0C0E4 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40ALP0C0E4 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.51□□□□□ -0.25
RAB40ALP0C0E4 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40ALP0C0E4 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
RAB40ALP0C0E4 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
RAB40ALP0C0E4 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
RAB40ALP0C0E4 AC027601.5-201ENST00000624065 2482 ntBASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms