Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
COL5A2P05997 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL5A2P05997 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
COL5A2P05997 AC024075.2-201ENST00000598112 1473 ntBASIC18.22■□□□□ 0.51
COL5A2P05997 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL5A2P05997 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL5A2P05997 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COL5A2P05997 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
COL5A2P05997 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL5A2P05997 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL5A2P05997 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC18.22■□□□□ 0.51
COL5A2P05997 HLA-W-207ENST00000439514 771 ntBASIC18.22■□□□□ 0.51
COL5A2P05997 IGHVII-74-1-201ENST00000517572 241 ntBASIC18.22■□□□□ 0.51
COL5A2P05997 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC18.22■□□□□ 0.51
COL5A2P05997 AC009065.4-201ENST00000563734 543 ntTSL 3 BASIC18.22■□□□□ 0.51
COL5A2P05997 ABCC6P1-203ENST00000565566 1170 ntBASIC18.22■□□□□ 0.51
COL5A2P05997 AL031710.1-201ENST00000570022 468 ntTSL 2 BASIC18.22■□□□□ 0.51
COL5A2P05997 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
COL5A2P05997 AC137723.2-201ENST00000623540 398 ntBASIC18.22■□□□□ 0.51
COL5A2P05997 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL5A2P05997 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL5A2P05997 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC18.22■□□□□ 0.51
COL5A2P05997 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL5A2P05997 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
COL5A2P05997 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COL5A2P05997 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
COL5A2P05997 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL5A2P05997 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL5A2P05997 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL5A2P05997 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL5A2P05997 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL5A2P05997 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL5A2P05997 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC18.22■□□□□ 0.51
COL5A2P05997 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
COL5A2P05997 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC18.22■□□□□ 0.51
COL5A2P05997 AC012617.1-204ENST00000586340 2305 ntBASIC18.22■□□□□ 0.51
COL5A2P05997 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
COL5A2P05997 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL5A2P05997 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
COL5A2P05997 PSMC5-212ENST00000581882 1474 ntTSL 5 BASIC18.22■□□□□ 0.51
COL5A2P05997 AL121753.2-201ENST00000624581 1461 ntBASIC18.22■□□□□ 0.51
COL5A2P05997 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
COL5A2P05997 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
COL5A2P05997 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
COL5A2P05997 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC18.22■□□□□ 0.51
COL5A2P05997 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.21■□□□□ 0.51
COL5A2P05997 AC011477.7-201ENST00000617163 1440 ntBASIC18.21■□□□□ 0.51
COL5A2P05997 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL5A2P05997 WFDC2-203ENST00000342873 818 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL5A2P05997 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL5A2P05997 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC18.21■□□□□ 0.51
COL5A2P05997 OR2W3-201ENST00000360358 945 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
COL5A2P05997 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL5A2P05997 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC18.21■□□□□ 0.51
COL5A2P05997 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
COL5A2P05997 RN7SL173P-201ENST00000461853 292 ntBASIC18.21■□□□□ 0.51
COL5A2P05997 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC18.21■□□□□ 0.51
COL5A2P05997 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC18.21■□□□□ 0.51
COL5A2P05997 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL5A2P05997 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
COL5A2P05997 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL5A2P05997 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL5A2P05997 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC18.21■□□□□ 0.51
COL5A2P05997 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
COL5A2P05997 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL5A2P05997 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.21■□□□□ 0.51
COL5A2P05997 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.21■□□□□ 0.51
COL5A2P05997 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
COL5A2P05997 AP001267.2-201ENST00000532619 2086 ntBASIC18.21■□□□□ 0.51
COL5A2P05997 FES-204ENST00000414248 2327 ntTSL 2 BASIC18.21■□□□□ 0.51
COL5A2P05997 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC18.21■□□□□ 0.51
COL5A2P05997 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
COL5A2P05997 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC18.21■□□□□ 0.51
COL5A2P05997 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
COL5A2P05997 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
COL5A2P05997 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC18.2■□□□□ 0.5
COL5A2P05997 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL5A2P05997 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL5A2P05997 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL5A2P05997 MIR339-201ENST00000362153 94 ntBASIC18.2■□□□□ 0.5
COL5A2P05997 KCNK15-AS1-202ENST00000427303 528 ntTSL 5 BASIC18.2■□□□□ 0.5
COL5A2P05997 AL356000.1-201ENST00000441073 1238 ntBASIC18.2■□□□□ 0.5
COL5A2P05997 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC18.2■□□□□ 0.5
COL5A2P05997 AL353622.2-201ENST00000605846 425 ntBASIC18.2■□□□□ 0.5
COL5A2P05997 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL5A2P05997 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC18.2■□□□□ 0.5
COL5A2P05997 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
COL5A2P05997 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL5A2P05997 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
COL5A2P05997 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL5A2P05997 AC113367.3-201ENST00000508316 1912 ntBASIC18.2■□□□□ 0.5
COL5A2P05997 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL5A2P05997 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC18.2■□□□□ 0.5
COL5A2P05997 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL5A2P05997 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
COL5A2P05997 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
COL5A2P05997 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC18.2■□□□□ 0.5
COL5A2P05997 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL5A2P05997 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
COL5A2P05997 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms