Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOC1P02654 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.79□□□□□ -0.36
APOC1P02654 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC1P02654 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC1P02654 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.79□□□□□ -0.36
APOC1P02654 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
APOC1P02654 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC12.79□□□□□ -0.36
APOC1P02654 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.79□□□□□ -0.36
APOC1P02654 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC1P02654 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC1P02654 AC011474.4-201ENST00000623523 2076 ntBASIC12.79□□□□□ -0.36
APOC1P02654 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.79□□□□□ -0.36
APOC1P02654 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.79□□□□□ -0.36
APOC1P02654 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
APOC1P02654 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC1P02654 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
APOC1P02654 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC1P02654 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.78□□□□□ -0.36
APOC1P02654 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC1P02654 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
APOC1P02654 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC1P02654 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APOC1P02654 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.78□□□□□ -0.36
APOC1P02654 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.78□□□□□ -0.36
APOC1P02654 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.78□□□□□ -0.36
APOC1P02654 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC1P02654 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC12.78□□□□□ -0.36
APOC1P02654 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.78□□□□□ -0.36
APOC1P02654 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.78□□□□□ -0.36
APOC1P02654 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APOC1P02654 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APOC1P02654 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.78□□□□□ -0.36
APOC1P02654 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC1P02654 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.78□□□□□ -0.36
APOC1P02654 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.78□□□□□ -0.36
APOC1P02654 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APOC1P02654 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APOC1P02654 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC1P02654 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APOC1P02654 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC1P02654 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.78□□□□□ -0.36
APOC1P02654 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC12.78□□□□□ -0.36
APOC1P02654 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC12.78□□□□□ -0.36
APOC1P02654 RN7SL692P-201ENST00000464677 288 ntBASIC12.78□□□□□ -0.36
APOC1P02654 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
APOC1P02654 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APOC1P02654 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC1P02654 COX5BP1-201ENST00000507622 393 ntBASIC12.78□□□□□ -0.36
APOC1P02654 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APOC1P02654 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.78□□□□□ -0.36
APOC1P02654 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
APOC1P02654 FUZ-207ENST00000526575 482 ntTSL 4 BASIC12.78□□□□□ -0.36
APOC1P02654 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APOC1P02654 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.78□□□□□ -0.36
APOC1P02654 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.78□□□□□ -0.36
APOC1P02654 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
APOC1P02654 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC12.78□□□□□ -0.36
APOC1P02654 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC12.78□□□□□ -0.36
APOC1P02654 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.78□□□□□ -0.36
APOC1P02654 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC12.78□□□□□ -0.36
APOC1P02654 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
APOC1P02654 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC1P02654 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
APOC1P02654 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC1P02654 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
APOC1P02654 PTPRVP-205ENST00000641549 5067 ntBASIC12.78□□□□□ -0.36
APOC1P02654 ABCA2-202ENST00000341511 8063 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
APOC1P02654 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC1P02654 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
APOC1P02654 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
APOC1P02654 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC1P02654 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.78□□□□□ -0.36
APOC1P02654 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC12.78□□□□□ -0.36
APOC1P02654 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
APOC1P02654 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
APOC1P02654 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.78□□□□□ -0.36
APOC1P02654 AC011498.7-201ENST00000624986 2027 ntBASIC12.78□□□□□ -0.36
APOC1P02654 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APOC1P02654 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
APOC1P02654 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
APOC1P02654 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
APOC1P02654 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
APOC1P02654 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
APOC1P02654 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.77□□□□□ -0.36
APOC1P02654 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.77□□□□□ -0.36
APOC1P02654 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
APOC1P02654 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.77□□□□□ -0.36
APOC1P02654 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC12.77□□□□□ -0.36
APOC1P02654 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
APOC1P02654 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
APOC1P02654 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
APOC1P02654 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
APOC1P02654 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.77□□□□□ -0.36
APOC1P02654 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
APOC1P02654 AC083964.2-201ENST00000623988 2396 ntBASIC12.77□□□□□ -0.36
APOC1P02654 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC1P02654 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC1P02654 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC1P02654 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
APOC1P02654 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms