Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
SSSCA1O60232 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
SSSCA1O60232 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC11.74□□□□□ -0.53
SSSCA1O60232 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
SSSCA1O60232 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
SSSCA1O60232 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC11.74□□□□□ -0.53
SSSCA1O60232 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC11.74□□□□□ -0.53
SSSCA1O60232 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC11.74□□□□□ -0.53
SSSCA1O60232 DFFA-202ENST00000377038 6032 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
SSSCA1O60232 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
SSSCA1O60232 WRB-204ENST00000398753 699 ntTSL 3 BASIC11.74□□□□□ -0.53
SSSCA1O60232 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC11.74□□□□□ -0.53
SSSCA1O60232 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC11.74□□□□□ -0.53
SSSCA1O60232 KLF2P3-201ENST00000451977 1087 ntBASIC11.74□□□□□ -0.53
SSSCA1O60232 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 RN7SL399P-201ENST00000471648 279 ntBASIC11.74□□□□□ -0.53
SSSCA1O60232 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC11.74□□□□□ -0.53
SSSCA1O60232 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC11.74□□□□□ -0.53
SSSCA1O60232 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
SSSCA1O60232 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC11.74□□□□□ -0.53
SSSCA1O60232 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 BTBD7P1-201ENST00000447253 1453 ntBASIC11.74□□□□□ -0.53
SSSCA1O60232 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
SSSCA1O60232 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
SSSCA1O60232 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC11.74□□□□□ -0.53
SSSCA1O60232 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC11.74□□□□□ -0.53
SSSCA1O60232 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
SSSCA1O60232 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
SSSCA1O60232 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 RHPN1-AS1-201ENST00000518049 1918 ntBASIC11.74□□□□□ -0.53
SSSCA1O60232 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
SSSCA1O60232 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 AC004623.1-201ENST00000624592 2127 ntBASIC11.74□□□□□ -0.53
SSSCA1O60232 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC11.74□□□□□ -0.53
SSSCA1O60232 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC11.74□□□□□ -0.53
SSSCA1O60232 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
SSSCA1O60232 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
SSSCA1O60232 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC11.73□□□□□ -0.53
SSSCA1O60232 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC11.73□□□□□ -0.53
SSSCA1O60232 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SSSCA1O60232 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSSCA1O60232 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSSCA1O60232 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSSCA1O60232 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSSCA1O60232 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSSCA1O60232 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SSSCA1O60232 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSSCA1O60232 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC11.73□□□□□ -0.53
SSSCA1O60232 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC11.73□□□□□ -0.53
SSSCA1O60232 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC11.73□□□□□ -0.53
SSSCA1O60232 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSSCA1O60232 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSSCA1O60232 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSSCA1O60232 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSSCA1O60232 C1QBPP1-201ENST00000400117 770 ntBASIC11.73□□□□□ -0.53
SSSCA1O60232 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
SSSCA1O60232 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSSCA1O60232 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC11.73□□□□□ -0.53
SSSCA1O60232 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
SSSCA1O60232 AC073869.1-201ENST00000415574 2762 ntBASIC11.73□□□□□ -0.53
SSSCA1O60232 BDNF-208ENST00000418212 4125 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
SSSCA1O60232 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC11.73□□□□□ -0.53
SSSCA1O60232 WDR73-202ENST00000434634 5387 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms