Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 RN7SL455P-201ENST00000580629 282 ntBASIC14.39□□□□□ -0.11
SMAD6O43541 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC14.39□□□□□ -0.11
SMAD6O43541 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC14.39□□□□□ -0.11
SMAD6O43541 AL133467.4-201ENST00000602953 725 ntBASIC14.39□□□□□ -0.11
SMAD6O43541 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMAD6O43541 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC14.39□□□□□ -0.11
SMAD6O43541 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.39□□□□□ -0.11
SMAD6O43541 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SMAD6O43541 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SMAD6O43541 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.39□□□□□ -0.11
SMAD6O43541 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
SMAD6O43541 API5-208ENST00000531273 1868 ntTSL 2 BASIC14.39□□□□□ -0.11
SMAD6O43541 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMAD6O43541 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.39□□□□□ -0.11
SMAD6O43541 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.39□□□□□ -0.11
SMAD6O43541 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
SMAD6O43541 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMAD6O43541 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SMAD6O43541 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMAD6O43541 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.39□□□□□ -0.11
SMAD6O43541 AC090643.2-201ENST00000623442 2029 ntBASIC14.39□□□□□ -0.11
SMAD6O43541 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMAD6O43541 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.39□□□□□ -0.11
SMAD6O43541 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMAD6O43541 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SMAD6O43541 AC006480.2-201ENST00000609770 1337 ntBASIC14.39□□□□□ -0.11
SMAD6O43541 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SMAD6O43541 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SMAD6O43541 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SMAD6O43541 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.38□□□□□ -0.11
SMAD6O43541 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMAD6O43541 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC14.38□□□□□ -0.11
SMAD6O43541 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMAD6O43541 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.38□□□□□ -0.11
SMAD6O43541 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.38□□□□□ -0.11
SMAD6O43541 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.38□□□□□ -0.11
SMAD6O43541 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMAD6O43541 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMAD6O43541 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMAD6O43541 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMAD6O43541 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMAD6O43541 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMAD6O43541 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
SMAD6O43541 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SMAD6O43541 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SMAD6O43541 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMAD6O43541 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.38□□□□□ -0.11
SMAD6O43541 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMAD6O43541 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMAD6O43541 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMAD6O43541 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMAD6O43541 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMAD6O43541 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMAD6O43541 AL627422.1-201ENST00000434104 580 ntBASIC14.38□□□□□ -0.11
SMAD6O43541 AC069218.1-201ENST00000435269 762 ntBASIC14.38□□□□□ -0.11
SMAD6O43541 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC14.38□□□□□ -0.11
SMAD6O43541 CHCHD2P2-201ENST00000503744 321 ntBASIC14.38□□□□□ -0.11
SMAD6O43541 MRPL22P1-201ENST00000505398 616 ntBASIC14.38□□□□□ -0.11
SMAD6O43541 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC14.38□□□□□ -0.11
SMAD6O43541 LY6E-208ENST00000520531 490 ntTSL 2 BASIC14.38□□□□□ -0.11
SMAD6O43541 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
SMAD6O43541 CMC2-204ENST00000562713 573 ntTSL 3 BASIC14.38□□□□□ -0.11
SMAD6O43541 CMC2-209ENST00000565108 399 ntTSL 2 BASIC14.38□□□□□ -0.11
SMAD6O43541 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC14.38□□□□□ -0.11
SMAD6O43541 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.38□□□□□ -0.11
SMAD6O43541 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC14.38□□□□□ -0.11
SMAD6O43541 AC005632.3-201ENST00000605544 308 ntBASIC14.38□□□□□ -0.11
SMAD6O43541 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC14.38□□□□□ -0.11
SMAD6O43541 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC14.38□□□□□ -0.11
SMAD6O43541 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
SMAD6O43541 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SMAD6O43541 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMAD6O43541 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMAD6O43541 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.38□□□□□ -0.11
SMAD6O43541 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMAD6O43541 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMAD6O43541 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMAD6O43541 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMAD6O43541 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMAD6O43541 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
SMAD6O43541 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SMAD6O43541 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.38□□□□□ -0.11
SMAD6O43541 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.38□□□□□ -0.11
SMAD6O43541 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SMAD6O43541 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.37□□□□□ -0.11
SMAD6O43541 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.37□□□□□ -0.11
SMAD6O43541 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMAD6O43541 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.37□□□□□ -0.11
SMAD6O43541 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SMAD6O43541 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMAD6O43541 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMAD6O43541 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMAD6O43541 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SMAD6O43541 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
SMAD6O43541 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.37□□□□□ -0.11
SMAD6O43541 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMAD6O43541 TCAM1P-207ENST00000485295 1537 ntBASIC14.37□□□□□ -0.11
SMAD6O43541 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
SMAD6O43541 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SMAD6O43541 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms