Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
DDX49Q9Y6V7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
DDX49Q9Y6V7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
DDX49Q9Y6V7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC26.92■■□□□ 1.9
DDX49Q9Y6V7 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
DDX49Q9Y6V7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
DDX49Q9Y6V7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
DDX49Q9Y6V7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
DDX49Q9Y6V7 AC092028.1-203ENST00000608262 953 ntBASIC26.92■■□□□ 1.9
DDX49Q9Y6V7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC26.92■■□□□ 1.9
DDX49Q9Y6V7 AC008406.3-201ENST00000620001 1374 ntBASIC26.92■■□□□ 1.9
DDX49Q9Y6V7 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC26.92■■□□□ 1.9
DDX49Q9Y6V7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC26.92■■□□□ 1.9
DDX49Q9Y6V7 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
DDX49Q9Y6V7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC26.92■■□□□ 1.9
DDX49Q9Y6V7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
DDX49Q9Y6V7 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
DDX49Q9Y6V7 AC019069.1-201ENST00000610008 1333 ntBASIC26.91■■□□□ 1.9
DDX49Q9Y6V7 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
DDX49Q9Y6V7 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
DDX49Q9Y6V7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC26.91■■□□□ 1.9
DDX49Q9Y6V7 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
DDX49Q9Y6V7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC26.91■■□□□ 1.9
DDX49Q9Y6V7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC26.91■■□□□ 1.9
DDX49Q9Y6V7 GAK-223ENST00000628912 497 ntTSL 5 BASIC26.91■■□□□ 1.9
DDX49Q9Y6V7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC26.91■■□□□ 1.9
DDX49Q9Y6V7 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.9■■□□□ 1.9
DDX49Q9Y6V7 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
DDX49Q9Y6V7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
DDX49Q9Y6V7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC26.9■■□□□ 1.9
DDX49Q9Y6V7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC26.9■■□□□ 1.9
DDX49Q9Y6V7 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
DDX49Q9Y6V7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
DDX49Q9Y6V7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC26.9■■□□□ 1.9
DDX49Q9Y6V7 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
DDX49Q9Y6V7 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
DDX49Q9Y6V7 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
DDX49Q9Y6V7 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC26.89■■□□□ 1.9
DDX49Q9Y6V7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
DDX49Q9Y6V7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC26.89■■□□□ 1.9
DDX49Q9Y6V7 LSM7-203ENST00000585409 512 ntTSL 2 BASIC26.89■■□□□ 1.9
DDX49Q9Y6V7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC26.89■■□□□ 1.9
DDX49Q9Y6V7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.89■■□□□ 1.9
DDX49Q9Y6V7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC26.89■■□□□ 1.89
DDX49Q9Y6V7 HLA-L-211ENST00000482052 1765 ntBASIC26.89■■□□□ 1.89
DDX49Q9Y6V7 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.89
DDX49Q9Y6V7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC26.88■■□□□ 1.89
DDX49Q9Y6V7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
DDX49Q9Y6V7 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC26.88■■□□□ 1.89
DDX49Q9Y6V7 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC26.88■■□□□ 1.89
DDX49Q9Y6V7 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
DDX49Q9Y6V7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.88■■□□□ 1.89
DDX49Q9Y6V7 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.88■■□□□ 1.89
DDX49Q9Y6V7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
DDX49Q9Y6V7 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
DDX49Q9Y6V7 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
DDX49Q9Y6V7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC26.87■■□□□ 1.89
DDX49Q9Y6V7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC26.87■■□□□ 1.89
DDX49Q9Y6V7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
DDX49Q9Y6V7 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
DDX49Q9Y6V7 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
DDX49Q9Y6V7 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
DDX49Q9Y6V7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC26.87■■□□□ 1.89
DDX49Q9Y6V7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC26.87■■□□□ 1.89
DDX49Q9Y6V7 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC26.86■■□□□ 1.89
DDX49Q9Y6V7 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
DDX49Q9Y6V7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
DDX49Q9Y6V7 PEMT-206ENST00000435340 960 ntTSL 5 BASIC26.86■■□□□ 1.89
DDX49Q9Y6V7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC26.86■■□□□ 1.89
DDX49Q9Y6V7 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC26.86■■□□□ 1.89
DDX49Q9Y6V7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
DDX49Q9Y6V7 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC26.85■■□□□ 1.89
DDX49Q9Y6V7 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC26.85■■□□□ 1.89
DDX49Q9Y6V7 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC26.85■■□□□ 1.89
DDX49Q9Y6V7 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
DDX49Q9Y6V7 FOXO3B-201ENST00000395675 1928 ntBASIC26.85■■□□□ 1.89
DDX49Q9Y6V7 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
DDX49Q9Y6V7 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC26.85■■□□□ 1.89
DDX49Q9Y6V7 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC26.85■■□□□ 1.89
DDX49Q9Y6V7 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC26.85■■□□□ 1.89
DDX49Q9Y6V7 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC26.85■■□□□ 1.89
DDX49Q9Y6V7 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
DDX49Q9Y6V7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
DDX49Q9Y6V7 STK25-234ENST00000535007 2459 ntTSL 2 BASIC26.84■■□□□ 1.89
DDX49Q9Y6V7 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
DDX49Q9Y6V7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC26.84■■□□□ 1.89
DDX49Q9Y6V7 EP400NL-214ENST00000641289 2402 ntBASIC26.84■■□□□ 1.89
DDX49Q9Y6V7 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC26.84■■□□□ 1.89
DDX49Q9Y6V7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC26.84■■□□□ 1.89
DDX49Q9Y6V7 AC233723.2-201ENST00000623798 2106 ntBASIC26.84■■□□□ 1.89
DDX49Q9Y6V7 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
DDX49Q9Y6V7 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
DDX49Q9Y6V7 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
DDX49Q9Y6V7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC26.83■■□□□ 1.89
DDX49Q9Y6V7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC26.83■■□□□ 1.89
DDX49Q9Y6V7 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
DDX49Q9Y6V7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC26.83■■□□□ 1.89
DDX49Q9Y6V7 AF131216.4-201ENST00000638924 1588 ntBASIC26.83■■□□□ 1.89
DDX49Q9Y6V7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
DDX49Q9Y6V7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms