Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
GPC6Q9Y625 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
GPC6Q9Y625 KRT8P33-201ENST00000508125 1423 ntBASIC21.22■□□□□ 0.99
GPC6Q9Y625 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.22■□□□□ 0.99
GPC6Q9Y625 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.22■□□□□ 0.99
GPC6Q9Y625 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.22■□□□□ 0.99
GPC6Q9Y625 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
GPC6Q9Y625 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
GPC6Q9Y625 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GPC6Q9Y625 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC21.21■□□□□ 0.99
GPC6Q9Y625 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GPC6Q9Y625 KRT18P24-201ENST00000344739 1156 ntBASIC21.21■□□□□ 0.99
GPC6Q9Y625 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.21■□□□□ 0.99
GPC6Q9Y625 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
GPC6Q9Y625 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
GPC6Q9Y625 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.2■□□□□ 0.98
GPC6Q9Y625 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
GPC6Q9Y625 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.2■□□□□ 0.98
GPC6Q9Y625 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
GPC6Q9Y625 ANOS2P-203ENST00000472227 1816 ntBASIC21.2■□□□□ 0.98
GPC6Q9Y625 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
GPC6Q9Y625 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.2■□□□□ 0.98
GPC6Q9Y625 AC131274.2-201ENST00000580697 1507 ntBASIC21.19■□□□□ 0.98
GPC6Q9Y625 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
GPC6Q9Y625 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GPC6Q9Y625 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.19■□□□□ 0.98
GPC6Q9Y625 AC120024.1-201ENST00000562672 995 ntBASIC21.19■□□□□ 0.98
GPC6Q9Y625 THA1P-201ENST00000590384 1145 ntBASIC21.19■□□□□ 0.98
GPC6Q9Y625 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
GPC6Q9Y625 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GPC6Q9Y625 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
GPC6Q9Y625 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GPC6Q9Y625 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
GPC6Q9Y625 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GPC6Q9Y625 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC21.18■□□□□ 0.98
GPC6Q9Y625 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GPC6Q9Y625 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.18■□□□□ 0.98
GPC6Q9Y625 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GPC6Q9Y625 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC21.18■□□□□ 0.98
GPC6Q9Y625 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.18■□□□□ 0.98
GPC6Q9Y625 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
GPC6Q9Y625 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
GPC6Q9Y625 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.18■□□□□ 0.98
GPC6Q9Y625 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
GPC6Q9Y625 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.18■□□□□ 0.98
GPC6Q9Y625 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
GPC6Q9Y625 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.18■□□□□ 0.98
GPC6Q9Y625 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
GPC6Q9Y625 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
GPC6Q9Y625 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GPC6Q9Y625 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
GPC6Q9Y625 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
GPC6Q9Y625 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.17■□□□□ 0.98
GPC6Q9Y625 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.17■□□□□ 0.98
GPC6Q9Y625 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GPC6Q9Y625 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
GPC6Q9Y625 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
GPC6Q9Y625 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
GPC6Q9Y625 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
GPC6Q9Y625 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GPC6Q9Y625 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
GPC6Q9Y625 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
GPC6Q9Y625 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
GPC6Q9Y625 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
GPC6Q9Y625 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
GPC6Q9Y625 C9orf163-202ENST00000624034 2573 ntBASIC21.16■□□□□ 0.98
GPC6Q9Y625 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.16■□□□□ 0.98
GPC6Q9Y625 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GPC6Q9Y625 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
GPC6Q9Y625 AC092068.2-201ENST00000590491 1708 ntBASIC21.16■□□□□ 0.98
GPC6Q9Y625 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.16■□□□□ 0.98
GPC6Q9Y625 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
GPC6Q9Y625 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
GPC6Q9Y625 AC103724.3-201ENST00000564481 992 ntBASIC21.16■□□□□ 0.98
GPC6Q9Y625 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.16■□□□□ 0.98
GPC6Q9Y625 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.16■□□□□ 0.98
GPC6Q9Y625 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
GPC6Q9Y625 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
GPC6Q9Y625 AL121603.2-201ENST00000557373 2117 ntBASIC21.16■□□□□ 0.98
GPC6Q9Y625 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
GPC6Q9Y625 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
GPC6Q9Y625 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.15■□□□□ 0.98
GPC6Q9Y625 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
GPC6Q9Y625 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.15■□□□□ 0.98
GPC6Q9Y625 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.15■□□□□ 0.98
GPC6Q9Y625 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GPC6Q9Y625 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
GPC6Q9Y625 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
GPC6Q9Y625 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.15■□□□□ 0.98
GPC6Q9Y625 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
GPC6Q9Y625 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
GPC6Q9Y625 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
GPC6Q9Y625 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GPC6Q9Y625 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.14■□□□□ 0.97
GPC6Q9Y625 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
GPC6Q9Y625 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
GPC6Q9Y625 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.14■□□□□ 0.97
GPC6Q9Y625 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
GPC6Q9Y625 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
GPC6Q9Y625 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms