Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
NCDNQ9UBB6 AC104771.1-201ENST00000603335 964 ntBASIC22.54■■□□□ 1.2
NCDNQ9UBB6 AC066615.1-201ENST00000640911 628 ntBASIC22.54■■□□□ 1.2
NCDNQ9UBB6 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
NCDNQ9UBB6 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
NCDNQ9UBB6 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NCDNQ9UBB6 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
NCDNQ9UBB6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
NCDNQ9UBB6 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
NCDNQ9UBB6 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
NCDNQ9UBB6 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
NCDNQ9UBB6 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.53■■□□□ 1.2
NCDNQ9UBB6 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
NCDNQ9UBB6 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC22.53■■□□□ 1.2
NCDNQ9UBB6 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.53■■□□□ 1.2
NCDNQ9UBB6 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
NCDNQ9UBB6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC22.52■■□□□ 1.2
NCDNQ9UBB6 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.52■■□□□ 1.2
NCDNQ9UBB6 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NCDNQ9UBB6 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
NCDNQ9UBB6 AC073111.5-205ENST00000641717 521 ntBASIC22.52■■□□□ 1.2
NCDNQ9UBB6 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.52■■□□□ 1.2
NCDNQ9UBB6 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
NCDNQ9UBB6 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
NCDNQ9UBB6 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.52■■□□□ 1.2
NCDNQ9UBB6 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
NCDNQ9UBB6 AC131274.2-201ENST00000580697 1507 ntBASIC22.52■■□□□ 1.19
NCDNQ9UBB6 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
NCDNQ9UBB6 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.51■■□□□ 1.19
NCDNQ9UBB6 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.51■■□□□ 1.19
NCDNQ9UBB6 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.51■■□□□ 1.19
NCDNQ9UBB6 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC22.51■■□□□ 1.19
NCDNQ9UBB6 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
NCDNQ9UBB6 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
NCDNQ9UBB6 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
NCDNQ9UBB6 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
NCDNQ9UBB6 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.5■■□□□ 1.19
NCDNQ9UBB6 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
NCDNQ9UBB6 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
NCDNQ9UBB6 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
NCDNQ9UBB6 AC137761.2-201ENST00000561729 223 ntBASIC22.5■■□□□ 1.19
NCDNQ9UBB6 AC145350.3-201ENST00000569033 163 ntBASIC22.5■■□□□ 1.19
NCDNQ9UBB6 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
NCDNQ9UBB6 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
NCDNQ9UBB6 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
NCDNQ9UBB6 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.5■■□□□ 1.19
NCDNQ9UBB6 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
NCDNQ9UBB6 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
NCDNQ9UBB6 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
NCDNQ9UBB6 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.49■■□□□ 1.19
NCDNQ9UBB6 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC22.49■■□□□ 1.19
NCDNQ9UBB6 CDCA4P2-201ENST00000441182 718 ntBASIC22.49■■□□□ 1.19
NCDNQ9UBB6 AC026185.1-201ENST00000445748 174 ntBASIC22.49■■□□□ 1.19
NCDNQ9UBB6 AC006970.2-201ENST00000450065 779 ntBASIC22.49■■□□□ 1.19
NCDNQ9UBB6 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.49■■□□□ 1.19
NCDNQ9UBB6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC22.49■■□□□ 1.19
NCDNQ9UBB6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
NCDNQ9UBB6 AL109923.1-201ENST00000618799 583 ntBASIC22.49■■□□□ 1.19
NCDNQ9UBB6 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC22.49■■□□□ 1.19
NCDNQ9UBB6 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.49■■□□□ 1.19
NCDNQ9UBB6 AC097639.1-201ENST00000565519 1891 ntBASIC22.49■■□□□ 1.19
NCDNQ9UBB6 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
NCDNQ9UBB6 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
NCDNQ9UBB6 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC22.49■■□□□ 1.19
NCDNQ9UBB6 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
NCDNQ9UBB6 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NCDNQ9UBB6 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
NCDNQ9UBB6 PPP1R14BP3-201ENST00000509033 445 ntBASIC22.48■■□□□ 1.19
NCDNQ9UBB6 RAP2CP1-201ENST00000605103 478 ntBASIC22.48■■□□□ 1.19
NCDNQ9UBB6 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.48■■□□□ 1.19
NCDNQ9UBB6 VGF-203ENST00000611537 1622 ntTSL 5 BASIC22.48■■□□□ 1.19
NCDNQ9UBB6 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
NCDNQ9UBB6 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.48■■□□□ 1.19
NCDNQ9UBB6 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
NCDNQ9UBB6 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
NCDNQ9UBB6 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.47■■□□□ 1.19
NCDNQ9UBB6 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
NCDNQ9UBB6 AC006015.1-201ENST00000429970 570 ntBASIC22.47■■□□□ 1.19
NCDNQ9UBB6 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
NCDNQ9UBB6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.47■■□□□ 1.19
NCDNQ9UBB6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.47■■□□□ 1.19
NCDNQ9UBB6 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC22.47■■□□□ 1.19
NCDNQ9UBB6 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC22.47■■□□□ 1.19
NCDNQ9UBB6 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
NCDNQ9UBB6 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.47■■□□□ 1.19
NCDNQ9UBB6 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NCDNQ9UBB6 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NCDNQ9UBB6 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
NCDNQ9UBB6 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC22.46■■□□□ 1.19
NCDNQ9UBB6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
NCDNQ9UBB6 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.46■■□□□ 1.19
NCDNQ9UBB6 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
NCDNQ9UBB6 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.19
NCDNQ9UBB6 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
NCDNQ9UBB6 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.45■■□□□ 1.18
NCDNQ9UBB6 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC22.45■■□□□ 1.18
NCDNQ9UBB6 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
NCDNQ9UBB6 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
NCDNQ9UBB6 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
NCDNQ9UBB6 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms