Protein–RNA interactions for Protein: Q9NQ03

SCRT2, Transcriptional repressor scratch 2, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCRT2Q9NQ03 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCRT2Q9NQ03 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCRT2Q9NQ03 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCRT2Q9NQ03 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC16.73■□□□□ 0.27
SCRT2Q9NQ03 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC16.73■□□□□ 0.27
SCRT2Q9NQ03 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC16.73■□□□□ 0.27
SCRT2Q9NQ03 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCRT2Q9NQ03 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCRT2Q9NQ03 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SCRT2Q9NQ03 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCRT2Q9NQ03 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCRT2Q9NQ03 AC090877.2-201ENST00000558441 1738 ntBASIC16.73■□□□□ 0.27
SCRT2Q9NQ03 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SCRT2Q9NQ03 CD37-213ENST00000598095 1598 ntTSL 2 BASIC16.72■□□□□ 0.27
SCRT2Q9NQ03 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SCRT2Q9NQ03 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SCRT2Q9NQ03 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SCRT2Q9NQ03 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCRT2Q9NQ03 AC092068.2-201ENST00000590491 1708 ntBASIC16.72■□□□□ 0.27
SCRT2Q9NQ03 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCRT2Q9NQ03 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SCRT2Q9NQ03 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC16.71■□□□□ 0.27
SCRT2Q9NQ03 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC16.71■□□□□ 0.27
SCRT2Q9NQ03 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC16.71■□□□□ 0.27
SCRT2Q9NQ03 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCRT2Q9NQ03 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCRT2Q9NQ03 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCRT2Q9NQ03 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SCRT2Q9NQ03 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC16.71■□□□□ 0.27
SCRT2Q9NQ03 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
SCRT2Q9NQ03 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCRT2Q9NQ03 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCRT2Q9NQ03 DUSP8P3-201ENST00000399571 1760 ntBASIC16.71■□□□□ 0.27
SCRT2Q9NQ03 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCRT2Q9NQ03 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SCRT2Q9NQ03 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCRT2Q9NQ03 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCRT2Q9NQ03 EI24-213ENST00000618552 1747 ntTSL 5 BASIC16.7■□□□□ 0.26
SCRT2Q9NQ03 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC16.7■□□□□ 0.26
SCRT2Q9NQ03 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCRT2Q9NQ03 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCRT2Q9NQ03 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCRT2Q9NQ03 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
SCRT2Q9NQ03 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCRT2Q9NQ03 AC009831.1-201ENST00000580420 1582 ntBASIC16.7■□□□□ 0.26
SCRT2Q9NQ03 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCRT2Q9NQ03 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCRT2Q9NQ03 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC16.7■□□□□ 0.26
SCRT2Q9NQ03 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SCRT2Q9NQ03 AL033527.3-201ENST00000566366 1196 ntBASIC16.7■□□□□ 0.26
SCRT2Q9NQ03 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC16.7■□□□□ 0.26
SCRT2Q9NQ03 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCRT2Q9NQ03 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
SCRT2Q9NQ03 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SCRT2Q9NQ03 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SCRT2Q9NQ03 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SCRT2Q9NQ03 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCRT2Q9NQ03 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC16.69■□□□□ 0.26
SCRT2Q9NQ03 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCRT2Q9NQ03 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCRT2Q9NQ03 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCRT2Q9NQ03 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC16.69■□□□□ 0.26
SCRT2Q9NQ03 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCRT2Q9NQ03 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCRT2Q9NQ03 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
SCRT2Q9NQ03 RPS2P7-201ENST00000447334 885 ntBASIC16.69■□□□□ 0.26
SCRT2Q9NQ03 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCRT2Q9NQ03 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCRT2Q9NQ03 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
SCRT2Q9NQ03 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCRT2Q9NQ03 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCRT2Q9NQ03 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SCRT2Q9NQ03 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC16.69■□□□□ 0.26
SCRT2Q9NQ03 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCRT2Q9NQ03 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SCRT2Q9NQ03 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCRT2Q9NQ03 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC16.68■□□□□ 0.26
SCRT2Q9NQ03 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SCRT2Q9NQ03 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCRT2Q9NQ03 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.68■□□□□ 0.26
SCRT2Q9NQ03 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
SCRT2Q9NQ03 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SCRT2Q9NQ03 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC16.68■□□□□ 0.26
SCRT2Q9NQ03 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SCRT2Q9NQ03 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCRT2Q9NQ03 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SCRT2Q9NQ03 SSSCA1-AS1-201ENST00000567594 614 ntBASIC16.68■□□□□ 0.26
SCRT2Q9NQ03 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SCRT2Q9NQ03 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.68■□□□□ 0.26
SCRT2Q9NQ03 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC16.67■□□□□ 0.26
SCRT2Q9NQ03 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SCRT2Q9NQ03 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SCRT2Q9NQ03 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
SCRT2Q9NQ03 AL137060.1-201ENST00000618151 2648 ntBASIC16.67■□□□□ 0.26
SCRT2Q9NQ03 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SCRT2Q9NQ03 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC16.67■□□□□ 0.26
SCRT2Q9NQ03 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC16.67■□□□□ 0.26
SCRT2Q9NQ03 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC16.67■□□□□ 0.26
SCRT2Q9NQ03 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SCRT2Q9NQ03 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms