Protein–RNA interactions for Protein: Q9HCN8

SDF2L1, Stromal cell-derived factor 2-like protein 1, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1Q9HCN8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SDF2L1Q9HCN8 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SDF2L1Q9HCN8 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SDF2L1Q9HCN8 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SDF2L1Q9HCN8 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SDF2L1Q9HCN8 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SDF2L1Q9HCN8 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SDF2L1Q9HCN8 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SDF2L1Q9HCN8 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.59■□□□□ 0.41
SDF2L1Q9HCN8 MED25-210ENST00000612854 801 ntTSL 5 BASIC17.59■□□□□ 0.41
SDF2L1Q9HCN8 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SDF2L1Q9HCN8 MED25-214ENST00000622402 642 ntTSL 5 BASIC17.59■□□□□ 0.41
SDF2L1Q9HCN8 CR559946.2-201ENST00000623684 991 ntBASIC17.59■□□□□ 0.41
SDF2L1Q9HCN8 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
SDF2L1Q9HCN8 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SDF2L1Q9HCN8 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SDF2L1Q9HCN8 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SDF2L1Q9HCN8 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SDF2L1Q9HCN8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC17.58■□□□□ 0.41
SDF2L1Q9HCN8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
SDF2L1Q9HCN8 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
SDF2L1Q9HCN8 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SDF2L1Q9HCN8 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SDF2L1Q9HCN8 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SDF2L1Q9HCN8 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
SDF2L1Q9HCN8 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SDF2L1Q9HCN8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SDF2L1Q9HCN8 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SDF2L1Q9HCN8 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC17.58■□□□□ 0.4
SDF2L1Q9HCN8 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SDF2L1Q9HCN8 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC17.58■□□□□ 0.4
SDF2L1Q9HCN8 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
SDF2L1Q9HCN8 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SDF2L1Q9HCN8 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
SDF2L1Q9HCN8 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SDF2L1Q9HCN8 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
SDF2L1Q9HCN8 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
SDF2L1Q9HCN8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SDF2L1Q9HCN8 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SDF2L1Q9HCN8 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SDF2L1Q9HCN8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC17.57■□□□□ 0.4
SDF2L1Q9HCN8 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SDF2L1Q9HCN8 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SDF2L1Q9HCN8 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SDF2L1Q9HCN8 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SDF2L1Q9HCN8 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.56■□□□□ 0.4
SDF2L1Q9HCN8 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SDF2L1Q9HCN8 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.56■□□□□ 0.4
SDF2L1Q9HCN8 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SDF2L1Q9HCN8 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SDF2L1Q9HCN8 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC17.56■□□□□ 0.4
SDF2L1Q9HCN8 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SDF2L1Q9HCN8 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SDF2L1Q9HCN8 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC17.56■□□□□ 0.4
SDF2L1Q9HCN8 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SDF2L1Q9HCN8 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.56■□□□□ 0.4
SDF2L1Q9HCN8 AC092667.1-201ENST00000434301 2586 ntBASIC17.56■□□□□ 0.4
SDF2L1Q9HCN8 C11orf96-202ENST00000528572 1834 ntBASIC17.56■□□□□ 0.4
SDF2L1Q9HCN8 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SDF2L1Q9HCN8 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
SDF2L1Q9HCN8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
SDF2L1Q9HCN8 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC17.55■□□□□ 0.4
SDF2L1Q9HCN8 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
SDF2L1Q9HCN8 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SDF2L1Q9HCN8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SDF2L1Q9HCN8 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SDF2L1Q9HCN8 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SDF2L1Q9HCN8 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SDF2L1Q9HCN8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SDF2L1Q9HCN8 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SDF2L1Q9HCN8 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SDF2L1Q9HCN8 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SDF2L1Q9HCN8 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SDF2L1Q9HCN8 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SDF2L1Q9HCN8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SDF2L1Q9HCN8 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SDF2L1Q9HCN8 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SDF2L1Q9HCN8 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SDF2L1Q9HCN8 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SDF2L1Q9HCN8 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SDF2L1Q9HCN8 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
SDF2L1Q9HCN8 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SDF2L1Q9HCN8 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SDF2L1Q9HCN8 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SDF2L1Q9HCN8 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.54■□□□□ 0.4
SDF2L1Q9HCN8 FBXW4P1-201ENST00000426721 2239 ntBASIC17.54■□□□□ 0.4
SDF2L1Q9HCN8 GDI1-215ENST00000630693 786 ntTSL 4 BASIC17.54■□□□□ 0.4
SDF2L1Q9HCN8 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SDF2L1Q9HCN8 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SDF2L1Q9HCN8 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.54■□□□□ 0.4
SDF2L1Q9HCN8 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SDF2L1Q9HCN8 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SDF2L1Q9HCN8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SDF2L1Q9HCN8 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SDF2L1Q9HCN8 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.53■□□□□ 0.4
SDF2L1Q9HCN8 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC17.53■□□□□ 0.4
SDF2L1Q9HCN8 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SDF2L1Q9HCN8 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SDF2L1Q9HCN8 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SDF2L1Q9HCN8 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms