Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SSBP3Q9BWW4 DUX4L19-201ENST00000557448 1267 ntBASIC18.79■□□□□ 0.6
SSBP3Q9BWW4 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.79■□□□□ 0.6
SSBP3Q9BWW4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.79■□□□□ 0.6
SSBP3Q9BWW4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.79■□□□□ 0.6
SSBP3Q9BWW4 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.79■□□□□ 0.6
SSBP3Q9BWW4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
SSBP3Q9BWW4 AC019069.1-201ENST00000610008 1333 ntBASIC18.78■□□□□ 0.6
SSBP3Q9BWW4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
SSBP3Q9BWW4 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SSBP3Q9BWW4 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SSBP3Q9BWW4 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
SSBP3Q9BWW4 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SSBP3Q9BWW4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC18.78■□□□□ 0.6
SSBP3Q9BWW4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
SSBP3Q9BWW4 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
SSBP3Q9BWW4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
SSBP3Q9BWW4 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SSBP3Q9BWW4 LINC01124-201ENST00000409786 2117 ntBASIC18.77■□□□□ 0.6
SSBP3Q9BWW4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SSBP3Q9BWW4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SSBP3Q9BWW4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SSBP3Q9BWW4 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SSBP3Q9BWW4 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SSBP3Q9BWW4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.77■□□□□ 0.6
SSBP3Q9BWW4 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
SSBP3Q9BWW4 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SSBP3Q9BWW4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SSBP3Q9BWW4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SSBP3Q9BWW4 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.59
SSBP3Q9BWW4 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
SSBP3Q9BWW4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSBP3Q9BWW4 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSBP3Q9BWW4 UNC93B3-201ENST00000308076 687 ntBASIC18.76■□□□□ 0.59
SSBP3Q9BWW4 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SSBP3Q9BWW4 MIR638-201ENST00000385237 100 ntBASIC18.76■□□□□ 0.59
SSBP3Q9BWW4 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SSBP3Q9BWW4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SSBP3Q9BWW4 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSBP3Q9BWW4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.76■□□□□ 0.59
SSBP3Q9BWW4 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SSBP3Q9BWW4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
SSBP3Q9BWW4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSBP3Q9BWW4 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSBP3Q9BWW4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC18.75■□□□□ 0.59
SSBP3Q9BWW4 C17orf82-201ENST00000623772 1530 ntBASIC18.75■□□□□ 0.59
SSBP3Q9BWW4 LINC00543-201ENST00000567234 1845 ntBASIC18.75■□□□□ 0.59
SSBP3Q9BWW4 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSBP3Q9BWW4 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSBP3Q9BWW4 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.75■□□□□ 0.59
SSBP3Q9BWW4 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SSBP3Q9BWW4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.75■□□□□ 0.59
SSBP3Q9BWW4 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SSBP3Q9BWW4 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SSBP3Q9BWW4 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC18.75■□□□□ 0.59
SSBP3Q9BWW4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSBP3Q9BWW4 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSBP3Q9BWW4 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSBP3Q9BWW4 AL139125.2-201ENST00000623134 1869 ntBASIC18.74■□□□□ 0.59
SSBP3Q9BWW4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SSBP3Q9BWW4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSBP3Q9BWW4 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSBP3Q9BWW4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SSBP3Q9BWW4 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSBP3Q9BWW4 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.74■□□□□ 0.59
SSBP3Q9BWW4 PBX2P1-201ENST00000493219 1291 ntBASIC18.74■□□□□ 0.59
SSBP3Q9BWW4 AL136162.1-201ENST00000607711 1078 ntBASIC18.74■□□□□ 0.59
SSBP3Q9BWW4 AC241377.3-202ENST00000626088 1088 ntBASIC18.74■□□□□ 0.59
SSBP3Q9BWW4 AC241585.3-202ENST00000628937 1088 ntBASIC18.74■□□□□ 0.59
SSBP3Q9BWW4 AC245100.8-202ENST00000629247 1058 ntBASIC18.74■□□□□ 0.59
SSBP3Q9BWW4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSBP3Q9BWW4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSBP3Q9BWW4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSBP3Q9BWW4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.74■□□□□ 0.59
SSBP3Q9BWW4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SSBP3Q9BWW4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SSBP3Q9BWW4 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SSBP3Q9BWW4 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SSBP3Q9BWW4 SYT6-210ENST00000641643 1587 ntBASIC18.73■□□□□ 0.59
SSBP3Q9BWW4 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SSBP3Q9BWW4 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SSBP3Q9BWW4 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.73■□□□□ 0.59
SSBP3Q9BWW4 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.73■□□□□ 0.59
SSBP3Q9BWW4 AC099791.2-201ENST00000605725 427 ntBASIC18.73■□□□□ 0.59
SSBP3Q9BWW4 AC106739.1-201ENST00000617035 715 ntBASIC18.73■□□□□ 0.59
SSBP3Q9BWW4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SSBP3Q9BWW4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SSBP3Q9BWW4 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.73■□□□□ 0.59
SSBP3Q9BWW4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SSBP3Q9BWW4 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SSBP3Q9BWW4 AC135279.3-201ENST00000610945 1311 ntBASIC18.73■□□□□ 0.59
SSBP3Q9BWW4 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SSBP3Q9BWW4 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSBP3Q9BWW4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SSBP3Q9BWW4 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSBP3Q9BWW4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SSBP3Q9BWW4 AC133561.4-201ENST00000566112 224 ntBASIC18.72■□□□□ 0.59
SSBP3Q9BWW4 SF1-220ENST00000626028 704 ntTSL 2 BASIC18.72■□□□□ 0.59
SSBP3Q9BWW4 THRA-202ENST00000394121 2260 ntTSL 2 BASIC18.72■□□□□ 0.59
SSBP3Q9BWW4 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 199.9 ms