Protein–RNA interactions for Protein: Q9BPW8

NIPSNAP1, Protein NipSnap homolog 1, humanhuman

Predictions only

Length 284 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP1Q9BPW8 AC131274.2-201ENST00000580697 1507 ntBASIC20.69■□□□□ 0.9
NIPSNAP1Q9BPW8 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NIPSNAP1Q9BPW8 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NIPSNAP1Q9BPW8 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NIPSNAP1Q9BPW8 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.69■□□□□ 0.9
NIPSNAP1Q9BPW8 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NIPSNAP1Q9BPW8 AC127496.7-201ENST00000625110 1798 ntBASIC20.69■□□□□ 0.9
NIPSNAP1Q9BPW8 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NIPSNAP1Q9BPW8 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NIPSNAP1Q9BPW8 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NIPSNAP1Q9BPW8 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.68■□□□□ 0.9
NIPSNAP1Q9BPW8 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NIPSNAP1Q9BPW8 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NIPSNAP1Q9BPW8 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
NIPSNAP1Q9BPW8 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.68■□□□□ 0.9
NIPSNAP1Q9BPW8 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NIPSNAP1Q9BPW8 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
NIPSNAP1Q9BPW8 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NIPSNAP1Q9BPW8 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NIPSNAP1Q9BPW8 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NIPSNAP1Q9BPW8 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NIPSNAP1Q9BPW8 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NIPSNAP1Q9BPW8 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
NIPSNAP1Q9BPW8 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NIPSNAP1Q9BPW8 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NIPSNAP1Q9BPW8 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NIPSNAP1Q9BPW8 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NIPSNAP1Q9BPW8 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NIPSNAP1Q9BPW8 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC20.67■□□□□ 0.9
NIPSNAP1Q9BPW8 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.67■□□□□ 0.9
NIPSNAP1Q9BPW8 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
NIPSNAP1Q9BPW8 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.67■□□□□ 0.9
NIPSNAP1Q9BPW8 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NIPSNAP1Q9BPW8 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
NIPSNAP1Q9BPW8 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
NIPSNAP1Q9BPW8 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
NIPSNAP1Q9BPW8 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NIPSNAP1Q9BPW8 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NIPSNAP1Q9BPW8 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
NIPSNAP1Q9BPW8 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC20.66■□□□□ 0.9
NIPSNAP1Q9BPW8 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NIPSNAP1Q9BPW8 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.66■□□□□ 0.9
NIPSNAP1Q9BPW8 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.66■□□□□ 0.9
NIPSNAP1Q9BPW8 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
NIPSNAP1Q9BPW8 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.66■□□□□ 0.9
NIPSNAP1Q9BPW8 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NIPSNAP1Q9BPW8 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
NIPSNAP1Q9BPW8 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NIPSNAP1Q9BPW8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
NIPSNAP1Q9BPW8 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC20.65■□□□□ 0.9
NIPSNAP1Q9BPW8 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NIPSNAP1Q9BPW8 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NIPSNAP1Q9BPW8 MIR6765-201ENST00000614092 87 ntBASIC20.65■□□□□ 0.9
NIPSNAP1Q9BPW8 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
NIPSNAP1Q9BPW8 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.65■□□□□ 0.9
NIPSNAP1Q9BPW8 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
NIPSNAP1Q9BPW8 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NIPSNAP1Q9BPW8 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
NIPSNAP1Q9BPW8 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.64■□□□□ 0.9
NIPSNAP1Q9BPW8 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
NIPSNAP1Q9BPW8 RNF126P1-201ENST00000567452 1320 ntBASIC20.64■□□□□ 0.89
NIPSNAP1Q9BPW8 LONRF2P2-201ENST00000439212 571 ntBASIC20.64■□□□□ 0.89
NIPSNAP1Q9BPW8 DUX4L9-201ENST00000449051 1259 ntBASIC20.64■□□□□ 0.89
NIPSNAP1Q9BPW8 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
NIPSNAP1Q9BPW8 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NIPSNAP1Q9BPW8 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NIPSNAP1Q9BPW8 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NIPSNAP1Q9BPW8 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NIPSNAP1Q9BPW8 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NIPSNAP1Q9BPW8 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.63■□□□□ 0.89
NIPSNAP1Q9BPW8 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NIPSNAP1Q9BPW8 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NIPSNAP1Q9BPW8 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
NIPSNAP1Q9BPW8 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.63■□□□□ 0.89
NIPSNAP1Q9BPW8 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NIPSNAP1Q9BPW8 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NIPSNAP1Q9BPW8 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NIPSNAP1Q9BPW8 AC137767.1-201ENST00000602918 1920 ntBASIC20.63■□□□□ 0.89
NIPSNAP1Q9BPW8 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NIPSNAP1Q9BPW8 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NIPSNAP1Q9BPW8 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NIPSNAP1Q9BPW8 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NIPSNAP1Q9BPW8 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.62■□□□□ 0.89
NIPSNAP1Q9BPW8 AC242852.2-201ENST00000615738 1807 ntBASIC20.62■□□□□ 0.89
NIPSNAP1Q9BPW8 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NIPSNAP1Q9BPW8 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
NIPSNAP1Q9BPW8 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
NIPSNAP1Q9BPW8 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NIPSNAP1Q9BPW8 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
NIPSNAP1Q9BPW8 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NIPSNAP1Q9BPW8 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.61■□□□□ 0.89
NIPSNAP1Q9BPW8 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NIPSNAP1Q9BPW8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NIPSNAP1Q9BPW8 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NIPSNAP1Q9BPW8 AC007375.3-201ENST00000600936 2314 ntBASIC20.6■□□□□ 0.89
NIPSNAP1Q9BPW8 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
NIPSNAP1Q9BPW8 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.6■□□□□ 0.89
NIPSNAP1Q9BPW8 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
NIPSNAP1Q9BPW8 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.6■□□□□ 0.89
NIPSNAP1Q9BPW8 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms