Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC47A1Q96FL8 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC47A1Q96FL8 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.24■□□□□ 0.99
SLC47A1Q96FL8 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC47A1Q96FL8 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC47A1Q96FL8 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
SLC47A1Q96FL8 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.24■□□□□ 0.99
SLC47A1Q96FL8 ECEL1P1-201ENST00000373592 1742 ntBASIC21.24■□□□□ 0.99
SLC47A1Q96FL8 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SLC47A1Q96FL8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SLC47A1Q96FL8 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC47A1Q96FL8 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC47A1Q96FL8 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.23■□□□□ 0.99
SLC47A1Q96FL8 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC47A1Q96FL8 H19-210ENST00000439725 1929 ntTSL 2 BASIC21.23■□□□□ 0.99
SLC47A1Q96FL8 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC21.23■□□□□ 0.99
SLC47A1Q96FL8 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC21.23■□□□□ 0.99
SLC47A1Q96FL8 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC47A1Q96FL8 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC21.23■□□□□ 0.99
SLC47A1Q96FL8 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SLC47A1Q96FL8 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC47A1Q96FL8 AC127496.7-201ENST00000625110 1798 ntBASIC21.23■□□□□ 0.99
SLC47A1Q96FL8 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SLC47A1Q96FL8 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
SLC47A1Q96FL8 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.23■□□□□ 0.99
SLC47A1Q96FL8 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC47A1Q96FL8 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC47A1Q96FL8 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.22■□□□□ 0.99
SLC47A1Q96FL8 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC47A1Q96FL8 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC47A1Q96FL8 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC47A1Q96FL8 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SLC47A1Q96FL8 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.22■□□□□ 0.99
SLC47A1Q96FL8 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SLC47A1Q96FL8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC47A1Q96FL8 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC47A1Q96FL8 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC47A1Q96FL8 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SLC47A1Q96FL8 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC47A1Q96FL8 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SLC47A1Q96FL8 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
SLC47A1Q96FL8 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SLC47A1Q96FL8 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.21■□□□□ 0.99
SLC47A1Q96FL8 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC47A1Q96FL8 NTF6A-201ENST00000591175 560 ntBASIC21.21■□□□□ 0.99
SLC47A1Q96FL8 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.21■□□□□ 0.99
SLC47A1Q96FL8 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SLC47A1Q96FL8 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC47A1Q96FL8 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
SLC47A1Q96FL8 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC47A1Q96FL8 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SLC47A1Q96FL8 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SLC47A1Q96FL8 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
SLC47A1Q96FL8 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC47A1Q96FL8 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC47A1Q96FL8 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC47A1Q96FL8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
SLC47A1Q96FL8 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.2■□□□□ 0.98
SLC47A1Q96FL8 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC47A1Q96FL8 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SLC47A1Q96FL8 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
SLC47A1Q96FL8 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC47A1Q96FL8 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SLC47A1Q96FL8 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC47A1Q96FL8 LONRF2P2-201ENST00000439212 571 ntBASIC21.19■□□□□ 0.98
SLC47A1Q96FL8 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC47A1Q96FL8 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC47A1Q96FL8 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SLC47A1Q96FL8 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SLC47A1Q96FL8 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC47A1Q96FL8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC47A1Q96FL8 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
SLC47A1Q96FL8 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC47A1Q96FL8 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
SLC47A1Q96FL8 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC47A1Q96FL8 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC47A1Q96FL8 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC21.18■□□□□ 0.98
SLC47A1Q96FL8 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC47A1Q96FL8 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.18■□□□□ 0.98
SLC47A1Q96FL8 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC47A1Q96FL8 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC47A1Q96FL8 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SLC47A1Q96FL8 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
SLC47A1Q96FL8 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC47A1Q96FL8 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC47A1Q96FL8 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC47A1Q96FL8 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC47A1Q96FL8 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC47A1Q96FL8 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC47A1Q96FL8 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SLC47A1Q96FL8 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SLC47A1Q96FL8 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
SLC47A1Q96FL8 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC47A1Q96FL8 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC47A1Q96FL8 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC47A1Q96FL8 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.16■□□□□ 0.98
SLC47A1Q96FL8 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC47A1Q96FL8 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC47A1Q96FL8 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC47A1Q96FL8 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms