Protein–RNA interactions for Protein: Q969M7

UBE2F, NEDD8-conjugating enzyme UBE2F, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2FQ969M7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBE2FQ969M7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.61■□□□□ 0.89
UBE2FQ969M7 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.61■□□□□ 0.89
UBE2FQ969M7 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
UBE2FQ969M7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
UBE2FQ969M7 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
UBE2FQ969M7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
UBE2FQ969M7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
UBE2FQ969M7 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
UBE2FQ969M7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBE2FQ969M7 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UBE2FQ969M7 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UBE2FQ969M7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UBE2FQ969M7 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.6■□□□□ 0.89
UBE2FQ969M7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
UBE2FQ969M7 AL161729.1-201ENST00000604104 1402 ntBASIC20.6■□□□□ 0.89
UBE2FQ969M7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.6■□□□□ 0.89
UBE2FQ969M7 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.6■□□□□ 0.89
UBE2FQ969M7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBE2FQ969M7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.59■□□□□ 0.89
UBE2FQ969M7 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.59■□□□□ 0.89
UBE2FQ969M7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.59■□□□□ 0.89
UBE2FQ969M7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.59■□□□□ 0.89
UBE2FQ969M7 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UBE2FQ969M7 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
UBE2FQ969M7 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBE2FQ969M7 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC20.58■□□□□ 0.89
UBE2FQ969M7 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBE2FQ969M7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
UBE2FQ969M7 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.58■□□□□ 0.89
UBE2FQ969M7 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.58■□□□□ 0.88
UBE2FQ969M7 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
UBE2FQ969M7 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
UBE2FQ969M7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBE2FQ969M7 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBE2FQ969M7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
UBE2FQ969M7 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.57■□□□□ 0.88
UBE2FQ969M7 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.57■□□□□ 0.88
UBE2FQ969M7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBE2FQ969M7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UBE2FQ969M7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBE2FQ969M7 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBE2FQ969M7 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UBE2FQ969M7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.56■□□□□ 0.88
UBE2FQ969M7 AC242852.2-201ENST00000615738 1807 ntBASIC20.56■□□□□ 0.88
UBE2FQ969M7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC20.56■□□□□ 0.88
UBE2FQ969M7 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
UBE2FQ969M7 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UBE2FQ969M7 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
UBE2FQ969M7 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
UBE2FQ969M7 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.55■□□□□ 0.88
UBE2FQ969M7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBE2FQ969M7 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
UBE2FQ969M7 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UBE2FQ969M7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.55■□□□□ 0.88
UBE2FQ969M7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
UBE2FQ969M7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
UBE2FQ969M7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.54■□□□□ 0.88
UBE2FQ969M7 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
UBE2FQ969M7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBE2FQ969M7 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
UBE2FQ969M7 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.54■□□□□ 0.88
UBE2FQ969M7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
UBE2FQ969M7 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
UBE2FQ969M7 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.54■□□□□ 0.88
UBE2FQ969M7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.54■□□□□ 0.88
UBE2FQ969M7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBE2FQ969M7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UBE2FQ969M7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.53■□□□□ 0.88
UBE2FQ969M7 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.53■□□□□ 0.88
UBE2FQ969M7 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UBE2FQ969M7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.53■□□□□ 0.88
UBE2FQ969M7 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBE2FQ969M7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBE2FQ969M7 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
UBE2FQ969M7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC20.53■□□□□ 0.88
UBE2FQ969M7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.53■□□□□ 0.88
UBE2FQ969M7 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBE2FQ969M7 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBE2FQ969M7 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBE2FQ969M7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UBE2FQ969M7 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBE2FQ969M7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
UBE2FQ969M7 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBE2FQ969M7 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBE2FQ969M7 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBE2FQ969M7 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.52■□□□□ 0.88
UBE2FQ969M7 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UBE2FQ969M7 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
UBE2FQ969M7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
UBE2FQ969M7 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
UBE2FQ969M7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
UBE2FQ969M7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
UBE2FQ969M7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
UBE2FQ969M7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
UBE2FQ969M7 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC20.51■□□□□ 0.87
UBE2FQ969M7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.51■□□□□ 0.87
UBE2FQ969M7 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UBE2FQ969M7 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.51■□□□□ 0.87
UBE2FQ969M7 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms