Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHD6Q8TD26 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CHD6Q8TD26 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHD6Q8TD26 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHD6Q8TD26 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CHD6Q8TD26 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.91■□□□□ 0.94
CHD6Q8TD26 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CHD6Q8TD26 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.91■□□□□ 0.94
CHD6Q8TD26 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CHD6Q8TD26 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHD6Q8TD26 AC090877.2-201ENST00000558441 1738 ntBASIC20.91■□□□□ 0.94
CHD6Q8TD26 KRT18P11-201ENST00000435214 1283 ntBASIC20.91■□□□□ 0.94
CHD6Q8TD26 SLC7A5P1-201ENST00000568957 537 ntBASIC20.91■□□□□ 0.94
CHD6Q8TD26 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHD6Q8TD26 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHD6Q8TD26 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC20.9■□□□□ 0.94
CHD6Q8TD26 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.9■□□□□ 0.94
CHD6Q8TD26 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.9■□□□□ 0.94
CHD6Q8TD26 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CHD6Q8TD26 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHD6Q8TD26 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC20.9■□□□□ 0.94
CHD6Q8TD26 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHD6Q8TD26 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHD6Q8TD26 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHD6Q8TD26 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHD6Q8TD26 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.89■□□□□ 0.94
CHD6Q8TD26 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.89■□□□□ 0.93
CHD6Q8TD26 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHD6Q8TD26 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CHD6Q8TD26 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.89■□□□□ 0.93
CHD6Q8TD26 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CHD6Q8TD26 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CHD6Q8TD26 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
CHD6Q8TD26 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.89■□□□□ 0.93
CHD6Q8TD26 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CHD6Q8TD26 KRT19P1-201ENST00000405746 1186 ntBASIC20.88■□□□□ 0.93
CHD6Q8TD26 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHD6Q8TD26 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.88■□□□□ 0.93
CHD6Q8TD26 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHD6Q8TD26 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHD6Q8TD26 AC131274.2-201ENST00000580697 1507 ntBASIC20.88■□□□□ 0.93
CHD6Q8TD26 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHD6Q8TD26 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.88■□□□□ 0.93
CHD6Q8TD26 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHD6Q8TD26 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD6Q8TD26 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHD6Q8TD26 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD6Q8TD26 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD6Q8TD26 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CHD6Q8TD26 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
CHD6Q8TD26 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.87■□□□□ 0.93
CHD6Q8TD26 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC20.87■□□□□ 0.93
CHD6Q8TD26 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD6Q8TD26 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CHD6Q8TD26 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD6Q8TD26 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CHD6Q8TD26 AL158047.1-201ENST00000445918 881 ntBASIC20.87■□□□□ 0.93
CHD6Q8TD26 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD6Q8TD26 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.87■□□□□ 0.93
CHD6Q8TD26 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.87■□□□□ 0.93
CHD6Q8TD26 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.87■□□□□ 0.93
CHD6Q8TD26 AL121832.2-201ENST00000610979 668 ntBASIC20.87■□□□□ 0.93
CHD6Q8TD26 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHD6Q8TD26 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC20.86■□□□□ 0.93
CHD6Q8TD26 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD6Q8TD26 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CHD6Q8TD26 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CHD6Q8TD26 AC091060.1-201ENST00000623524 1766 ntBASIC20.86■□□□□ 0.93
CHD6Q8TD26 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
CHD6Q8TD26 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CHD6Q8TD26 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
CHD6Q8TD26 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
CHD6Q8TD26 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.86■□□□□ 0.93
CHD6Q8TD26 LINC01023-201ENST00000606054 436 ntBASIC20.86■□□□□ 0.93
CHD6Q8TD26 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CHD6Q8TD26 UNC93B4-201ENST00000505679 747 ntBASIC20.85■□□□□ 0.93
CHD6Q8TD26 RNA5SP413-201ENST00000516373 109 ntBASIC20.85■□□□□ 0.93
CHD6Q8TD26 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
CHD6Q8TD26 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHD6Q8TD26 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHD6Q8TD26 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.85■□□□□ 0.93
CHD6Q8TD26 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CHD6Q8TD26 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.85■□□□□ 0.93
CHD6Q8TD26 AL449106.1-201ENST00000608517 1980 ntBASIC20.85■□□□□ 0.93
CHD6Q8TD26 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CHD6Q8TD26 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CHD6Q8TD26 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.85■□□□□ 0.93
CHD6Q8TD26 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC20.85■□□□□ 0.93
CHD6Q8TD26 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHD6Q8TD26 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.84■□□□□ 0.93
CHD6Q8TD26 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHD6Q8TD26 AC005181.1-201ENST00000604782 1256 ntBASIC20.84■□□□□ 0.93
CHD6Q8TD26 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHD6Q8TD26 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.84■□□□□ 0.93
CHD6Q8TD26 FOXO3B-201ENST00000395675 1928 ntBASIC20.84■□□□□ 0.93
CHD6Q8TD26 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CHD6Q8TD26 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CHD6Q8TD26 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CHD6Q8TD26 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CHD6Q8TD26 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms